RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 RPS23P62266 143 aaKnown RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 ERVK-25P63136 954 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 CCL8P80075 99 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 HPCAP84074 193 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 HOXC5Q00444 222 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 DEFA6Q01524 100 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 FADDQ13158 208 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 PMS2P3Q13401 168 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 IL18Q14116 193 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 RGNQ15493 299 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM155Q4W5P6 130 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC25A30Q5SVS4 291 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 C1orf146Q5VVC0 180 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 HSD17B13Q7Z5P4 300 aaPredicted RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 FUNDC1Q8IVP5 155 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 IFT20Q8IY31 132 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 C6orf223Q8N319 242 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC22A24Q8N4F4 322 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 MREGQ8N565 214 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TEX29Q8N6K0 151 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM252Q8N6L7 170 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SIGLECL1Q8N7X8 197 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 NKAPP1Q8N9T2 125 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 MNS1Q8NEH6 495 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC30A7Q8NEW0 376 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 NOXO1Q8NFA2 376 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 GPR32P1Q8NGA4 272 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 OR4D11Q8NGI4 311 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 OR51S1Q8NGJ8 323 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 OR9I1Q8NGQ6 314 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 OR52P1PQ8NH57 321 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 OR6X1Q8NH79 312 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNF563Q8TA94 476 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 PLPPR1Q8TBJ4 325 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 IFT81Q8WYA0 676 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 GTF2H4Q92759 462 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 ITCHQ96J02 903 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TECTBQ96PL2 329 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 PANX1Q96RD7 426 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 ARHGDIGQ99819 225 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SH3GL1Q99961 368 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 KCNS3Q9BQ31 491 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 PRSS27Q9BQR3 290 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 ULBP2Q9BZM5 246 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 BCL2L14Q9BZR8 327 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC19A3Q9BZV2 496 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 DPY30Q9C005 99 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 C1orf198Q9H425 327 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM38AQ9H6F2 299 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 AUNIPQ9H7T9 357 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 GEMIN7Q9H840 131 aaKnown RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TPT1P8Q9HAU6 139 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 NTN4Q9HB63 628 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 DYNLRB1Q9NP97 96 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SLCO1B3Q9NPD5 702 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 MMP26Q9NRE1 261 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 INPP5EQ9NRR6 644 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 MED29Q9NX70 200 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TAS2R5Q9NYW4 299 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 CALML5Q9NZT1 146 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 PDP1Q9P0J1 537 aaPredicted RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 FBXL3Q9UKT7 428 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 INSIG2Q9Y5U4 225 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 ALMS1Q8TCU4 4167 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 DSCAML1Q8TD84 2053 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 TET2Q6N021 2002 aaPredicted RBP1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 MDFIC2A0A1B0GVS7 189 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 OR6C6A6NF89 314 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 A6NIZ1 184 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 SMIM23A6NLE4 172 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 CEACAM18A8MTB9 384 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 CLDN25C9JDP6 229 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 L7N2F9 121 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 M0R3G1 203 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 FXYD1O00168 92 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 DLGAP1O14490 977 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 RFXANKO14593 260 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 HDAC3O15379 428 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 SOX15O60248 233 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 SPAG7O75391 227 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 CLPXO76031 633 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 KRT75O95678 551 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 RAB36O95755 333 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 HSPB1P04792 205 aaKnown RBP1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 IL6P05231 212 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 OR8G3PP0DMU2 310 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 CD79AP11912 226 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 CCL2P13500 99 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 IDO1P14902 403 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 GPX2P18283 190 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 TCN1P20061 433 aaPredicted RBP1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 ATP6V1B2P21281 511 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 BGNP21810 368 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 CXCR1P25024 350 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 S100A3P33764 101 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 GLP1RP43220 463 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 OR3A4PP47883 348 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 CSNK1A1P48729 337 aa1.76□□□□□ -2.13
SMARCB1-208ENST00000634926 ERFP50548 548 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms