RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 MMP28Q9H239 520 aa15.7■□□□□ 0.1
CROCCP4-202ENST00000633627 DPM3Q9P2X0 92 aa15.7■□□□□ 0.1
CROCCP4-202ENST00000633627 FBN1P35555 2871 aaKnown RBP15.7■□□□□ 0.1
CROCCP4-202ENST00000633627 LY6LH3BQJ8 138 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 BUB1B-PAK6H3BSN5 160 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 XRCC3O43542 346 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 APOA1P02647 267 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 EIF4EP06730 217 aaKnown RBP15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 IER3P46695 156 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 UBA52P62987 128 aaKnown RBP15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 MRPS15P82914 257 aaKnown RBP15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 SRSF7Q16629 238 aaKnown RBP eCLIP15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 LINC00311Q8N616 119 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 OR52L2PQ8NGH6 319 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 SSMEM1Q8WWF3 244 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 AUNIPQ9H7T9 357 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 OR2S2Q9NQN1 319 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 GNG12Q9UBI6 72 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 JPT1Q9UK76 154 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 COL6A5A8TX70 2615 aa15.69■□□□□ 0.1
CROCCP4-202ENST00000633627 TRDCB7Z8K6 153 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 SSX5O60225 188 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 IGHV4-59P01825 116 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 SCTP09683 121 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 DTYMKP23919 212 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 GNG10P50151 68 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 PITPNAQ00169 270 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 GNMTQ14749 295 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 SSX2Q16385 188 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 AANATQ16613 207 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 MORN2Q502X0 79 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 LY6G6FQ5SQ64 297 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 MZT2AQ6P582 158 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 Q6ZS49 121 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 IZUMO1Q8IYV9 350 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 OR10V1Q8NGI7 309 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 NUDCD2Q8WVJ2 157 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 CREB3L1Q96BA8 519 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 DUX5Q96PT3 197 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 CCDC59Q9P031 241 aaKnown RBP15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 ZNF230Q9UIE0 474 aaPredicted RBP15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 POMT1Q9Y6A1 747 aa15.68■□□□□ 0.1
CROCCP4-202ENST00000633627 IGKV1-6A0A0C4DH72 117 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 A0A1W2PPE3 182 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 VGLL3A8MV65 326 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 LEUTXA8MZ59 168 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 ZNF701M0R085 212 aaPredicted RBP15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 YPEL1O60688 119 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 HPGDSO60760 199 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 ELK1P19419 428 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 SOX6P35712 828 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 TALDO1P37837 337 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 ZNF134P52741 427 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 CT45A1Q5HYN5 189 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 STEAP3Q658P3 488 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 SLC25A48Q6ZT89 311 aaKnown RBP15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 CT45A3Q8NHU0 189 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 ZFAND2BQ8WV99 257 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 YPEL2Q96QA6 119 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 OCSTAMPQ9BR26 566 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 HILPDAQ9Y5L2 63 aa15.67■□□□□ 0.1
CROCCP4-202ENST00000633627 TRIM77I1YAP6 450 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 SLC31A2O15432 143 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 RNASE1P07998 156 aaKnown RBP15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 PPP1CCP36873 323 aaKnown RBP15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 GNG2P59768 71 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 HERPUD1Q15011 391 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 LRRC75BQ2VPJ9 315 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 KRTAP24-1Q3LI83 254 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 TPTE2P1Q5T6R2 138 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 DTX3Q8N9I9 347 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 OR4A4PQ8NGN8 299 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 PIFOQ8TCI5 191 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 IL1F10Q8WWZ1 152 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 MAFIPQ8WZ33 124 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 SSX3Q99909 188 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 DPAGT1Q9H3H5 408 aa15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 RSL24D1Q9UHA3 163 aaKnown RBP15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 AMMECR1Q9Y4X0 333 aaPredicted RBP15.66■□□□□ 0.1
CROCCP4-202ENST00000633627 IGKV1D-8A0A087WSZ0 117 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 CCDC160A6NGH7 325 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 FABP7O15540 132 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 GSTT2P0CG29 244 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 GSTT2BP0CG30 244 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 PTHLHP12272 177 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 CEACAM3P40198 252 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 KIR2DS4P43632 304 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 DYNLT3P51808 116 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 TAS2R20P59543 309 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 KIR2DS1Q14954 304 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 TMEM69Q5SWH9 247 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 ST6GALNAC6Q969X2 333 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 CHIAQ9BZP6 476 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 SLIRPQ9GZT3 109 aaKnown RBP15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 MIXL1Q9H2W2 232 aa15.65■□□□□ 0.1
CROCCP4-202ENST00000633627 SMIM31A0A1B0GVY4 71 aa15.64■□□□□ 0.09
CROCCP4-202ENST00000633627 OOSP1A8MZH6 123 aa15.64■□□□□ 0.09
CROCCP4-202ENST00000633627 RGS11O94810 467 aa15.64■□□□□ 0.09
CROCCP4-202ENST00000633627 DIRAS3O95661 229 aa15.64■□□□□ 0.09
CROCCP4-202ENST00000633627 HLA-DQB1P01920 261 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms