RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 WIPI2Q9Y4P8 454 aa10.26□□□□□ -0.77
SHPRH-211ENST00000629427 DOCK7Q96N67 2140 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 HMGA2P52926 109 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 TMEM255AQ5JRV8 349 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 BET1LQ9NYM9 111 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 MARF1Q9Y4F3 1742 aaKnown RBP10.25□□□□□ -0.77
SHPRH-211ENST00000629427 IGHV3-72A0A0B4J1Y9 119 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 DHRS7CA6NNS2 312 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF137PP52743 207 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 HIST3H3Q16695 136 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 XAF1Q6GPH4 301 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 PGLYRP3Q96LB9 341 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 TCRBV16S1A1N1A0A5B0 115 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 OGG1O15527 345 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 KLF7O75840 302 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-211ENST00000629427 HLA-DRB5Q30154 266 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 LDLRAD3Q86YD5 345 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF721Q8TF20 911 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 PRSS50Q9UI38 385 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 VAX2Q9UIW0 290 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 SMPD2O60906 423 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF735P0CB33 412 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 TEX30Q5JUR7 227 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 OR1N2Q8NGR9 330 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 OR4A5Q8NH83 315 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF385AQ96PM9 386 aaKnown RBP10.25□□□□□ -0.77
SHPRH-211ENST00000629427 CISD1Q9NZ45 108 aaKnown RBP10.25□□□□□ -0.77
SHPRH-211ENST00000629427 PDE6DO43924 150 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 UCP2P55851 309 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 B2MP61769 119 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 MRPL54Q6P161 138 aaKnown RBP10.25□□□□□ -0.77
SHPRH-211ENST00000629427 LRRC75AQ8NAA5 344 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 CHAC2Q8WUX2 184 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 NKX2-8O15522 239 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF253O75346 499 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 DEDDO75618 318 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 CELA2AP08217 269 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 ELOBQ15370 118 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 GABRA6Q16445 453 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF738Q8NE65 137 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 CCL19Q99731 98 aa10.25□□□□□ -0.77
SHPRH-211ENST00000629427 CACNA1IQ9P0X4 2223 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 RPL36A-HNRNPH2H7BZ11 118 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 BSXQ3C1V8 233 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 CLLU1Q5K131 121 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 SOSTQ9BQB4 213 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 PRO1933Q9H354 126 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 Q9N2K0 584 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 NKX2-6A6NCS4 301 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 ZNHIT1O43257 154 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 GAPDHP04406 335 aaKnown RBP10.24□□□□□ -0.77
SHPRH-211ENST00000629427 GFRA1P56159 465 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 SSX8Q7RTT4 187 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF488Q96MN9 340 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 ISLRO14498 428 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 SULT1A2P50226 295 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 TMEM50BP56557 158 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 PLPPR5Q32ZL2 321 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 DMKNQ6E0U4 476 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-211ENST00000629427 TMEM204Q9BSN7 226 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 IGHV1-45A0A0A0MS14 117 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 APCSP02743 223 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 BTF3P20290 206 aaKnown RBP10.24□□□□□ -0.77
SHPRH-211ENST00000629427 C19orf54Q5BKX5 351 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 PMS2CLQ68D20 193 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 ZNF880Q6PDB4 577 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 LYZL2Q7Z4W2 148 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 ZAR1Q86SH2 424 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 WDFY2Q96P53 400 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 CBY1Q9Y3M2 126 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 PSME4Q14997 1843 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 GREB1Q4ZG55 1949 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 BRWD3Q6RI45 1802 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 IGKV3D-11A0A0A0MRZ8 115 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 A0A1W2PPV9 198 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 GFRA3O60609 400 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 IGKV3-11P04433 115 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 NUBP1P53384 320 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 RELBQ01201 579 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 SLC25A53Q5H9E4 307 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 TPRX1Q8N7U7 411 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 PACRGQ96M98 296 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-211ENST00000629427 HDHD3Q9BSH5 251 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-211ENST00000629427 LRP5O75197 1615 aa10.24□□□□□ -0.77
SHPRH-211ENST00000629427 LOC102724200A0A096LPH7 203 aaPredicted RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 CORTO00230 105 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 RNASE1P07998 156 aaKnown RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 PEBP1P30086 187 aaKnown RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 LGALSLQ3ZCW2 172 aaPredicted RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 BVESQ8NE79 360 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 PAXXQ9BUH6 204 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 RTN4RQ9BZR6 473 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 AHRRA9YTQ3 701 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 PAGE4O60829 102 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 RPL29P47914 159 aaKnown RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 METTL1Q9UBP6 276 aaKnown RBP10.23□□□□□ -0.77
SHPRH-211ENST00000629427 FANCMQ8IYD8 2048 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 A0A1B0GU03 582 aa10.23□□□□□ -0.77
SHPRH-211ENST00000629427 SNRPCP09234 159 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms