RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SERPINA5P05154 406 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 CHRM2P08172 466 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 HIST1H1DP16402 221 aaKnown RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 GNB3P16520 340 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 CD34P28906 385 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 HRH1P35367 487 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 OR3A4PP47883 348 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 GMFBP60983 142 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 FOXL1Q12952 345 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 TBC1D28Q2M2D7 210 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 VAX1Q5SQQ9 334 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 AWAT2Q6E213 333 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 OR52W1Q6IF63 320 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 SLC51BQ86UW2 128 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 NAA40Q86UY6 237 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 HOGA1Q86XE5 327 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ANGPTL5Q86XS5 388 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 C1QL4Q86Z23 238 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 KCNRGQ8N5I3 272 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 EIF4E3Q8N5X7 224 aaKnown RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM104Q8NE00 496 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 SUN5Q8TC36 379 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 GLMPQ8WWB7 406 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ST8SIA2Q92186 375 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 LYZL4Q96KX0 146 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 MFFQ9GZY8 342 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 SDHAF2Q9NX18 166 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF224Q9NZL3 707 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF230Q9UIE0 474 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 TNFSF18Q9UNG2 199 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 MRPS28Q9Y2Q9 187 aaKnown RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 POLR1DQ9Y2S0 133 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 UBE2J1Q9Y385 318 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 SOX21Q9Y651 276 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 V9GYS6 101 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 PRKDCP78527 4128 aaKnown RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 A0A0U1RQV5 110 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 C5orf49A4QMS7 147 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 C5orf63A6NC05 138 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 RNF222A6NCQ9 220 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 A8MZ25 164 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 HLA-AP01891 365 aaKnown RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 FGF2P09038 288 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 UBBP0CG47 229 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 SLC2A1P11166 492 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 NR2C1P13056 603 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 MGMTP16455 207 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 MSR1P21757 451 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 PRTN3P24158 256 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 PRKXP51817 358 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 UCP2P55851 309 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 RPS27AP62979 156 aaKnown RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 FGL1Q08830 312 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 PNLIPRP3Q17RR3 467 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 RSPO1Q2MKA7 263 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ACSM6Q6P461 480 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 C11orf88Q6PI97 169 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 GLIPR1L1Q6UWM5 242 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ALKAL2Q6UX46 152 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 FAM89BQ8N5H3 189 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 OR1S1Q8NH92 325 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 AKR7LQ8NHP1 331 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 SELENOIQ9C0D9 397 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 A0A0D9SG52 128 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 DNAJC9-AS1A6NH13 148 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 OR5H14A6NHG9 310 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ZSCAN5BA6NJL1 495 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 OR2F2O95006 317 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 IGHV2-5P01817 119 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 MDKP21741 143 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 MPV17P39210 176 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM50BP56557 158 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 NHLH2Q02577 135 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 OR2F1Q13607 317 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 CD300EQ496F6 205 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 SCGB2B2Q4G0G5 96 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 PDLIM3Q53GG5 364 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ACTBL2Q562R1 376 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 PABPC1L2AQ5JQF8 200 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 C11orf87Q6NUJ2 197 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 FAM57BQ71RH2 274 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 HSD17B13Q7Z5P4 300 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF101Q8IZC7 436 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 CHST4Q8NCG5 386 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ADAD2Q8NCV1 583 aaKnown RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 KCNG3Q8TAE7 436 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 CYYR1Q96J86 154 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 SPACA5Q96QH8 159 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 OR2J1Q9GZK6 312 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 EGLN1Q9GZT9 426 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 WDR13Q9H1Z4 485 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 IFT46Q9NQC8 304 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 RDH8Q9NYR8 311 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TRBV6-7A0A0A0MS04 114 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 SOCS1O15524 211 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 BCL2L11O43521 198 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TIMM8AO60220 97 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 SCO1O75880 301 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 DUS4LO95620 317 aaKnown RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 RLN2P04090 185 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms