RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 FAM90A27PA6NNH2 459 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM90A22PA8MWA6 464 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM90A12PA8MX19 464 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM90A23PA8MXZ1 464 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 F2RL2O00254 374 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 HSPB6O14558 160 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 NDUFB6O95139 128 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CATP04040 527 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 REG1AP05451 166 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CTSBP07858 339 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC25A4P12235 298 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 TNFSF9P41273 254 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ERVK11-1P61568 191 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SERTAD4-AS1Q5TG53 156 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SPATA31B1PQ5VZV4 182 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PAQR6Q6TCH4 344 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM231DQ6ZW35 169 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 DEFB106AQ8N104 65 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 RBMXL3Q8N7X1 1067 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 LINC01599Q8WXQ3 324 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM37Q8WXS4 190 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SCGB3A2Q96PL1 93 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 IL23AQ9NPF7 189 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 TVP23BQ9NYZ1 205 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CD207Q9UJ71 328 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 DSPPQ9NZW4 1301 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 A0A087X0K7 114 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 A0A1B0GTL3 188 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 MS4A18H0YCH9 400 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 H0YL77 283 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 PLPP3O14495 311 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 TNFRSF10CO14798 259 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 NRASP01111 189 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 TFPIP10646 304 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 GATA3P23771 443 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 CD38P28907 300 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 IER3P46695 156 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 WNT3AP56704 352 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 ALG10BQ5I7T1 473 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM159AQ6UWV7 190 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 APOOLQ6UXV4 268 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 MEX3DQ86XN8 651 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 SIGLECL1Q8N7X8 197 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 OR2T33Q8NG76 320 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 NEIL2Q969S2 332 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 VOPP1Q96AW1 172 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 NIPSNAP3BQ9BS92 247 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 BANF2Q9H503 90 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 ACER3Q9NUN7 267 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 NINQ8N4C6 2090 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 A0A1B0GW64 132 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 HHLA1C9JL84 531 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 NPIPB11E5RHQ5 1161 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 GASTP01350 101 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 ATP1B1P05026 303 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM106CPP0CH98 169 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 RPL7P18124 248 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 ORM2P19652 201 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 ATP6V0CP27449 155 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 RUNX1Q01196 453 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 CD69Q07108 199 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM106AQ4KMX7 169 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 SYT14P1Q58G82 188 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 LRRC10Q5BKY1 277 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 MRPL14Q6P1L8 145 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 Q6ZVH6 145 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM19A5Q7Z5A7 132 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 GJC3Q8NFK1 279 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 OR1J2Q8NGS2 313 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 PP6455Q8WZ26 134 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 BORCS7Q96B45 105 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 ACY3Q96HD9 319 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 LINC00477Q96M19 166 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 SIGLEC12Q96PQ1 595 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 HSD17B10Q99714 261 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 ORAI3Q9BRQ5 295 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 MMP17Q9ULZ9 603 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 SPCS1Q9Y6A9 102 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 CMYA5Q8N3K9 4069 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 SCN1AP35498 2009 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 DUXBA0A1W2PPF3 345 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 J3QL48 77 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF354AO60765 605 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 CPSF4O95639 269 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 APODP05090 189 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 G6PCP35575 357 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 NBL1P41271 181 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 DHRS2Q13268 280 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 MELKQ14680 651 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM162BQ5T6X4 162 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 HES3Q5TGS1 186 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 STUMQ69YW2 141 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC23A3Q6PIS1 610 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 OR5AP2Q8NGF4 316 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 CCDC140Q96MF4 163 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 GGTLC1Q9BX51 225 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 HINT3Q9NQE9 182 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM100Q9NV29 134 aa3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 MRPS17Q9Y2R5 130 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-220ENST00000628915 FLVCR1Q9Y5Y0 555 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms