RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 CCDC88BA6NC98 1476 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 NPHP4O75161 1426 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 TROQ12816 1431 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 NSD3Q9BZ95 1437 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 TRIP11Q15643 1979 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PALLDQ8WX93 1383 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 KIF13BQ9NQT8 1826 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 TRAV38-1A0A0B4J264 116 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 A0A0G2JLM5 398 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 A0A1B0GX51 115 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 IFITM5A6NNB3 132 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF726A6NNF4 738 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF724A8MTY0 619 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 AIPO00170 330 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 UPK1AO00322 258 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 HSD17B6O14756 317 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PPIHO43447 177 aaKnown RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 FKBP6O75344 327 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 GCM2O75603 506 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 SNAPC5O75971 98 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 HPRT1P00492 218 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 OXTP01178 125 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 IGHV2-5P01817 119 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ADRA2AP08913 450 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PSG2P11465 335 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 BCKDHAP12694 445 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PVRP15151 417 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 EVI2AP22794 236 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 KDELR1P24390 212 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 BRS3P32247 399 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 GNG4P50150 75 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 GZMMP51124 257 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 RAB38P57729 211 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 FBXW4P57775 412 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PFN3P60673 137 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 RPS14P62263 151 aaKnown RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 RPS27AP62979 156 aaKnown RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 GNG5P63218 68 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 CAV1Q03135 178 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 RUNX3Q13761 415 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 TMEM241Q24JQ0 296 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF181Q2M3W8 571 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ACOT6Q3I5F7 207 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 UNC50Q53HI1 259 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PYY3Q5JQD4 70 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 IZUMO2Q6UXV1 221 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 HSD11B1LQ7Z5J1 315 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ARPINQ7Z6K5 226 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 MRPL55Q7Z7F7 128 aaKnown RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 LINC01561Q8N1V8 128 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 SVBPQ8N300 66 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 OR2L13Q8N349 312 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 TMEM86BQ8N661 226 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 SAMD12Q8N8I0 201 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 COX18Q8N8Q8 333 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ZNRF1Q8ND25 227 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 OR4M1Q8NGD0 313 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 OR1N2Q8NGR9 330 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 OR13C8Q8NGS7 320 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 OR2G3Q8NGZ4 309 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 RHOXF1Q8NHV9 184 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF675Q8TD23 568 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 VN1R17PQ8TDU5 208 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 GPR148Q8TDV2 347 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 SLC37A2Q8TED4 501 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF418Q8TF45 676 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PNPLA2Q96AD5 504 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 EEF1AKMT3Q96AZ1 226 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 BORCS7Q96B45 105 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PGLYRP3Q96LB9 341 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 HSFY1Q96LI6 401 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 LINC00052Q96N35 136 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 OR4K3Q96R72 315 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 NRIP2Q9BQI9 281 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ANAPC13Q9BS18 74 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 AGMATQ9BSE5 352 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 NDFIP1Q9BT67 221 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 TMEM121Q9BTD3 319 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ULBP3Q9BZM4 244 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ZBP1Q9H171 429 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 OR2D2Q9H210 308 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 CXXC4Q9H2H0 198 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 PRO1933Q9H354 126 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 SRMSQ9H3Y6 488 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 METTL17Q9H7H0 456 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 POPDC3Q9HBV1 291 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 SLC25A19Q9HC21 320 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 HES4Q9HCC6 221 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 SH2D2AQ9NP31 389 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 GPR84Q9NQS5 396 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 MMP26Q9NRE1 261 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 STARD5Q9NSY2 213 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 LYRM2Q9NU23 88 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-223ENST00000628857 ACER3Q9NUN7 267 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 UQCC1Q9NVA1 299 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 NAT8BQ9UHF3 227 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 CES1P1Q9UKY3 287 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 TBX21Q9UL17 535 aa2.27□□□□□ -2.05
CNOT1-223ENST00000628857 MCTS1Q9ULC4 181 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms