RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 BTBD17A6NE02 478 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 VGLL3A8MV65 326 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 LEUTXA8MZ59 168 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 FCGR3AP08637 254 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 GSTP1P09211 210 aaKnown RBP16.41■□□□□ 0.22
PTCD3-220ENST00000627371 CEACAM3P40198 252 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 ARFRP1Q13795 201 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 ZNF260Q3ZCT1 412 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 CDNFQ49AH0 187 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 FAM53AQ6NSI3 398 aaPredicted RBP16.41■□□□□ 0.22
PTCD3-220ENST00000627371 LINC00311Q8N616 119 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 OR5R1Q8NH85 324 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 CHIAQ9BZP6 476 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 OR2S2Q9NQN1 319 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 TNFRSF19Q9NS68 423 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 HILPDAQ9Y5L2 63 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 COL6A5A8TX70 2615 aa16.41■□□□□ 0.22
PTCD3-220ENST00000627371 RNF212BA8MTL3 300 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 LY6LH3BQJ8 138 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 NOL3O60936 208 aaKnown RBP16.4■□□□□ 0.22
PTCD3-220ENST00000627371 SPCS2Q15005 226 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 HACD4Q5VWC8 232 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 C16orf87Q6PH81 154 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.4■□□□□ 0.22
PTCD3-220ENST00000627371 SAMD12Q8N8I0 201 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 ZNF439Q8NDP4 499 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 OR10V1Q8NGI7 309 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 ACOT12Q8WYK0 555 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 VPREB3Q9UKI3 123 aa16.4■□□□□ 0.22
PTCD3-220ENST00000627371 ELF5Q9UKW6 265 aaPredicted RBP16.4■□□□□ 0.22
PTCD3-220ENST00000627371 A0A1W2PPE3 182 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 TMEM235A6NFC5 223 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 H3BUX3 64 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 GNMTQ14749 295 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 PNLIPRP3Q17RR3 467 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 MORN2Q502X0 79 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 PLA1AQ53H76 456 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 TPTE2P1Q5T6R2 138 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 STEAP3Q658P3 488 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 OR52L2PQ8NGH6 319 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 OR10X1Q8NGY0 326 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 IL1F10Q8WWZ1 152 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 AP3S1Q92572 193 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 MDFIQ99750 246 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 OCSTAMPQ9BR26 566 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 C19orf24Q9BVV8 132 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 DIABLOQ9NR28 239 aa16.39■□□□□ 0.21
PTCD3-220ENST00000627371 TRAV18A0A075B6X5 111 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 OOSP1A8MZH6 123 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 TRDCB7Z8K6 153 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 YPEL1O60688 119 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 ZNF182P17025 639 aaPredicted RBP16.38■□□□□ 0.21
PTCD3-220ENST00000627371 DTYMKP23919 212 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 TALDO1P37837 337 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 DYNLT3P51808 116 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 PITPNAQ00169 270 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 MADCAM1Q13477 382 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 LY6G6FQ5SQ64 297 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 SLC25A48Q6ZT89 311 aaKnown RBP16.38■□□□□ 0.21
PTCD3-220ENST00000627371 ISOC1Q96CN7 298 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 S100A16Q96FQ6 103 aaKnown RBP16.38■□□□□ 0.21
PTCD3-220ENST00000627371 CMTM3Q96MX0 182 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 YPEL2Q96QA6 119 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 COMMD3Q9UBI1 195 aa16.38■□□□□ 0.21
PTCD3-220ENST00000627371 H3BMQ9 156 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 SLC31A2O15432 143 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 XRCC3O43542 346 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 RGS11O94810 467 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 SCTP09683 121 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 PPP1CCP36873 323 aaKnown RBP16.37■□□□□ 0.21
PTCD3-220ENST00000627371 KIR2DS4P43632 304 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 GNG2P59768 71 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 KIR2DS1Q14954 304 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 SRSF7Q16629 238 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTCD3-220ENST00000627371 Q6ZS49 121 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 PIFOQ8TCI5 191 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 NUDCD2Q8WVJ2 157 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 TOMM40LQ969M1 308 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 RPEQ96AT9 228 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 ABCB10Q9NRK6 738 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 ZNF230Q9UIE0 474 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-220ENST00000627371 CEPT1Q9Y6K0 416 aa16.37■□□□□ 0.21
PTCD3-220ENST00000627371 ARHGDIBP52566 201 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 ZNF134P52741 427 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 RPL15P61313 204 aaKnown RBP16.36■□□□□ 0.21
PTCD3-220ENST00000627371 CT45A1Q5HYN5 189 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 CCDC144NLQ6NUI1 221 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 MZT2AQ6P582 158 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 IZUMO1Q8IYV9 350 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 OR4A4PQ8NGN8 299 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 CT45A3Q8NHU0 189 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 ABHD14AQ9BUJ0 271 aa16.36■□□□□ 0.21
PTCD3-220ENST00000627371 FAM181BA6NEQ2 426 aa16.35■□□□□ 0.21
PTCD3-220ENST00000627371 FABP7O15540 132 aa16.35■□□□□ 0.21
PTCD3-220ENST00000627371 GPR137BO60478 399 aa16.35■□□□□ 0.21
PTCD3-220ENST00000627371 APOA1P02647 267 aa16.35■□□□□ 0.21
PTCD3-220ENST00000627371 EIF4EP06730 217 aaKnown RBP16.35■□□□□ 0.21
PTCD3-220ENST00000627371 ZBTB25P24278 435 aa16.35■□□□□ 0.21
PTCD3-220ENST00000627371 IL3RAP26951 378 aa16.35■□□□□ 0.21
PTCD3-220ENST00000627371 SOX6P35712 828 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms