RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 METTL9Q9H1A3 318 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 TPSG1Q9NRR2 321 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 IMPAD1Q9NX62 359 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 KIAA1456Q9P272 454 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 STUB1Q9UNE7 303 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 POMPQ9Y244 141 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
PNKP-218ENST00000625299 ERGIC3Q9Y282 383 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 A8MZ25 164 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 LANCL1O43813 399 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 NDPQ00604 133 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 SYT6Q5T7P8 510 aaPredicted RBP11.28□□□□□ -0.6
PNKP-218ENST00000625299 ZNF497Q6ZNH5 498 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 ACBD7Q8N6N7 88 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 OR4K15Q8NH41 348 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 OR5AK2Q8NH90 309 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 FLYWCH2Q96CP2 140 aaKnown RBP11.28□□□□□ -0.6
PNKP-218ENST00000625299 S100A13Q99584 98 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 ALG8Q9BVK2 526 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 MRPL20Q9BYC9 149 aaKnown RBP11.28□□□□□ -0.6
PNKP-218ENST00000625299 CST11Q9H112 138 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 IFT22Q9H7X7 185 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 RETNQ9HD89 108 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 RAB9BQ9NP90 201 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
PNKP-218ENST00000625299 TMEM212A6NML5 194 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 J3QRE1 110 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 GYG2O15488 501 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 HBZP02008 142 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
PNKP-218ENST00000625299 LRRC36Q1X8D7 754 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 AMIGO2Q86SJ2 522 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 LINC00596Q86U02 117 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 LHFPL3Q86UP9 236 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 MRPL48Q96GC5 212 aaKnown RBP11.27□□□□□ -0.61
PNKP-218ENST00000625299 MS4A10Q96PG2 267 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 TMED9Q9BVK6 235 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 GABARAPL3Q9BY60 117 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 TUBA4BQ9H853 241 aa11.27□□□□□ -0.61
PNKP-218ENST00000625299 ISG20L2Q9H9L3 353 aaKnown RBP11.27□□□□□ -0.61
PNKP-218ENST00000625299 A0A1W2PP11 408 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 E9PI62 339 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 IGLV1-51P01701 117 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 RPSAP08865 295 aaKnown RBP11.26□□□□□ -0.61
PNKP-218ENST00000625299 TPPP2P59282 170 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 GNMTQ14749 295 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 PLGLAQ15195 96 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 MPV17LQ2QL34 196 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 DNAL1Q4LDG9 190 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 NHLRC3Q5JS37 347 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 C6orf183Q5T699 404 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 ASCL4Q6XD76 172 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 CCDC197Q8NCU1 140 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 ABHD14AQ9BUJ0 271 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 OR2S2Q9NQN1 319 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 ETAA1Q9NY74 926 aa11.26□□□□□ -0.61
PNKP-218ENST00000625299 MCRIP1C9JLW8 97 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 FASP25445 335 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 ZNF93P35789 620 aaPredicted RBP11.25□□□□□ -0.61
PNKP-218ENST00000625299 ADARB1P78563 741 aaKnown RBP11.25□□□□□ -0.61
PNKP-218ENST00000625299 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 SLC22A6Q4U2R8 563 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 C19orf54Q5BKX5 351 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 DDI2Q5TDH0 399 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 ZNF529Q6P280 563 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 OR52L2PQ8NGH6 319 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 IL17DQ8TAD2 202 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 FAM103A1Q9BTL3 118 aaKnown RBP11.25□□□□□ -0.61
PNKP-218ENST00000625299 JAM3Q9BX67 310 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 FBXL15Q9H469 300 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 IL36GQ9NZH8 169 aa11.25□□□□□ -0.61
PNKP-218ENST00000625299 RCC1P18754 421 aaPredicted RBP11.24□□□□□ -0.61
PNKP-218ENST00000625299 OR3A3P47888 321 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 CX3CL1P78423 397 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 MORN2Q502X0 79 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 ACTBL2Q562R1 376 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 PYHIN1Q6K0P9 492 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 UNQ5815/PRO19632Q6UWF5 114 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 GTSCR1Q86UQ5 136 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 TCTEX1D1Q8N7M0 179 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 NPBQ8NG41 125 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 LGALS12Q96DT0 336 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 PAK1IP1Q9NWT1 392 aaPredicted RBP11.24□□□□□ -0.61
PNKP-218ENST00000625299 AASSQ9UDR5 926 aa11.24□□□□□ -0.61
PNKP-218ENST00000625299 NDUFA3O95167 84 aa11.23□□□□□ -0.61
PNKP-218ENST00000625299 TRGV3P03979 118 aa11.23□□□□□ -0.61
PNKP-218ENST00000625299 CD2P06729 351 aa11.23□□□□□ -0.61
PNKP-218ENST00000625299 GTF2F2P13984 249 aa11.23□□□□□ -0.61
PNKP-218ENST00000625299 CD40LGP29965 261 aa11.23□□□□□ -0.61
PNKP-218ENST00000625299 PPP1CCP36873 323 aaKnown RBP11.23□□□□□ -0.61
PNKP-218ENST00000625299 GBX2P52951 348 aaPredicted RBP11.23□□□□□ -0.61
PNKP-218ENST00000625299 PPP3R1P63098 170 aa11.23□□□□□ -0.61
PNKP-218ENST00000625299 TMEM267Q0VDI3 215 aaPredicted RBP11.23□□□□□ -0.61
PNKP-218ENST00000625299 STEAP3Q658P3 488 aa11.23□□□□□ -0.61
PNKP-218ENST00000625299 ZNF660Q6AZW8 331 aaPredicted RBP11.23□□□□□ -0.61
PNKP-218ENST00000625299 RAB12Q6IQ22 244 aa11.23□□□□□ -0.61
PNKP-218ENST00000625299 C5orf24Q7Z6I8 188 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1015 ms