RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 SPTAN1Q13813 2472 aaKnown RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 C7orf66A4D0T2 115 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 BGLAPP02818 100 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 RNF224P0DH78 156 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 ETV1P50549 477 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 CCR6P51684 374 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 SPACA3Q8IXA5 215 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 PFN4Q8NHR9 129 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 LINC01560Q8TB33 94 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 MANBALQ9NQG1 85 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 NAT8BQ9UHF3 227 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 PILRBQ9UKJ0 227 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 IFITM10A6NMD0 228 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 A8MV72 311 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 PATE3B3GLJ2 98 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 IGSF5Q9NSI5 407 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 ZDHHC18Q9NUE0 388 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 HCSTQ9UBK5 93 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 ARRDC5A6NEK1 342 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 LINC00587B1AMM8 73 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 TRDCB7Z8K6 153 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 GAB4Q2WGN9 574 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 OTOFQ9HC10 1997 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 J3QT63 122 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 TBX10O75333 385 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 NAT8Q9UHE5 227 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 TP53BP1Q12888 1972 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 SIGLEC1Q9BZZ2 1709 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 CEBPDP49716 269 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 KRTDAPP60985 99 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 CX3CL1P78423 397 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 TMEM186Q96B77 213 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 RTN4RQ9BZR6 473 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 RNF122Q9H9V4 155 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 OR51B2Q9Y5P1 312 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 CD68P34810 354 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 PRSS36Q5K4E3 855 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 SEMA5BQ9P283 1151 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 TINAGQ9UJW2 476 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 PRR32B1ATL7 298 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 SMIM6P0DI80 62 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 SLC6A1P30531 599 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 DEGS2Q6QHC5 323 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 TBL2Q9Y4P3 447 aaKnown RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 PDCD6O75340 191 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 NRIP2Q9BQI9 281 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 SYT11Q9BT88 431 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 CST9LQ9H4G1 147 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 ZNF629Q9UEG4 869 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 RIF1Q5UIP0 2472 aaKnown RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 LIMS1P48059 325 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 CKS1BP61024 79 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 DLK1P80370 383 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 SRSF7Q16629 238 aaKnown RBP eCLIP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 PRICKLE4Q2TBC4 344 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 S100A7L2Q5SY68 101 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 LCN12Q6JVE5 192 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 TMEM54Q969K7 222 aa5.5□□□□□ -1.53
CDKL5-205ENST00000623535 ZNF107Q9UII5 783 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-205ENST00000623535 RER1O15258 196 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 SPI1P17947 270 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 CLDN20P56880 219 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 LSM6P62312 80 aaKnown RBP5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TSPO2Q5TGU0 170 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 MYEOVQ96EZ4 313 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 MS4A3Q96HJ5 214 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 OR5AC2Q9NZP5 309 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 AP4M1O00189 453 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 CDAP32320 146 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 MPV17LQ2QL34 196 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 ABHD14BQ96IU4 210 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TMEM191AQ9H0A3 160 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 NEUROG3Q9Y4Z2 214 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 PCNX1Q96RV3 2341 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TRBV7-9A0A0J9YWB2 115 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TRBV4-1A0A0J9YWV2 114 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 J3QR06 171 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 PMP22Q01453 160 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 CYB5R1Q9UHQ9 305 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 RD3LP0DJH9 198 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 FAM71E1Q6IPT2 247 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 ARRDC1Q8N5I2 433 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 CXorf36Q9H7Y0 433 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 ZMAT3Q9HA38 289 aaKnown RBP5.49□□□□□ -1.53
CDKL5-205ENST00000623535 E9PLN8 166 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 CDIPTO14735 213 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 BTF3P20290 206 aaKnown RBP5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TDGF1P3P51864 188 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 SLC25A53Q5H9E4 307 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 Q5PR19 223 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 COLCA1Q6ZS62 124 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 OR2D3Q8NGH3 330 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 VKORC1Q9BQB6 163 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 BCL2L10Q9HD36 194 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 FAM221AA4D161 298 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 A6NDN8 102 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 ZNF737O75373 536 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 TNFSF13O75888 250 aa5.49□□□□□ -1.53
CDKL5-205ENST00000623535 CD80P33681 288 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms