RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ARPC4-TTLL3A0A0A6YYG9 625 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 ZNF785A8K8V0 405 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 ZNF701M0R085 212 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-229ENST00000622668 LINC00596Q86U02 117 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 CALHM1Q8IU99 346 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 OR10P1Q8NGE3 313 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 TMEM186Q96B77 213 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 P2RX4Q99571 388 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 REG4Q9BYZ8 158 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 SIRT4Q9Y6E7 314 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-229ENST00000622668 ZNF729A6NN14 1252 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-229ENST00000622668 TFF1P04155 84 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 OR13C7P0DN81 318 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 RAB6AP20340 208 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 CD24P25063 80 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 MC5RP33032 325 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 IL24Q13007 206 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 SLC38A6Q8IZM9 456 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 OR5AP2Q8NGF4 316 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 TRIM63Q969Q1 353 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 POFUT1Q9H488 388 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 G6PC2Q9NQR9 355 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 CCL28Q9NRJ3 127 aa7.69□□□□□ -1.18
HDAC9-229ENST00000622668 METTL1Q9UBP6 276 aaKnown RBP7.69□□□□□ -1.18
HDAC9-229ENST00000622668 STRAPQ9Y3F4 350 aaKnown RBP7.69□□□□□ -1.18
HDAC9-229ENST00000622668 C2CD3Q4AC94 2353 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 TRIM64CA6NLI5 447 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 SLC25A17O43808 307 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 AGAP20933 346 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 THBS3P49746 956 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 LOXL3P58215 753 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 HGFACQ04756 655 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 DEFB113Q30KQ7 82 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 RBMXL1Q96E39 390 aaKnown RBP7.68□□□□□ -1.18
HDAC9-229ENST00000622668 ST6GALNAC2Q9UJ37 374 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 NSG2Q9Y328 171 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 ACANP16112 2415 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 IGHV3-21A0A0B4J1V1 117 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 FBXO24O75426 580 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 UPK1BO75841 260 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 TCRBP04435 133 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 F2RP25116 425 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 IL34Q6ZMJ4 242 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 ZNF788Q6ZQV5 615 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 WFDC3Q8IUB2 231 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 OR5R1Q8NH85 324 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 GTF3AQ92664 365 aaKnown RBP7.68□□□□□ -1.18
HDAC9-229ENST00000622668 R3HDM4Q96D70 268 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 GRAMD2BQ96HH9 432 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 SEC22CQ9BRL7 303 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 TMEM165Q9HC07 324 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 BRCA2P51587 3418 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 NDUFS8O00217 210 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 SSSCA1O60232 199 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 IFNA1P01562 189 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 EVX1P49640 407 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 OR2F1Q13607 317 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 CXorf66Q5JRM2 361 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-229ENST00000622668 IL17RELQ6ZVW7 336 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 MINDY2Q8NBR6 621 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 OR4C16Q8NGL9 310 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 LILRB1Q8NHL6 650 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-229ENST00000622668 ITPKCQ96DU7 683 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 FKBP11Q9NYL4 201 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 RABAC1Q9UI14 185 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 PLXNA2O75051 1894 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 HTTP42858 3142 aa7.68□□□□□ -1.18
HDAC9-229ENST00000622668 CLEC18AA5D8T8 446 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 A6NHS1 94 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 C17orf112F2Z3M2 114 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 NUPL2O15504 423 aaKnown RBP7.67□□□□□ -1.18
HDAC9-229ENST00000622668 DKK1O94907 266 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 NPBWR1P48145 328 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 UBE2MP61081 183 aaKnown RBP7.67□□□□□ -1.18
HDAC9-229ENST00000622668 ELP2Q6IA86 826 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 HSD17B11Q8NBQ5 300 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 CLEC18CQ8NCF0 446 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 BVESQ8NE79 360 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 NUP37Q8NFH4 326 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 OR5M8Q8NGP6 311 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 CIB3Q96Q77 187 aaPredicted RBP7.67□□□□□ -1.18
HDAC9-229ENST00000622668 TREM1Q9NP99 234 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 WSB1Q9Y6I7 421 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 F12P00748 615 aaPredicted RBP7.67□□□□□ -1.18
HDAC9-229ENST00000622668 MSMBP08118 114 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 SOD3P08294 240 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 SULT1A3P0DMM9 295 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 SULT1A4P0DMN0 295 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 SELLP14151 372 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 PLA2G2AP14555 144 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 COX5AP20674 150 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 CRYBB2P43320 205 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 SLC35E3Q7Z769 313 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 SULT4A1Q9BR01 284 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 MFFQ9GZY8 342 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 NPAP1Q9NZP6 1156 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 PPYP01298 95 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 SNRNP70P08621 437 aaKnown RBP7.67□□□□□ -1.18
HDAC9-229ENST00000622668 FGF2P09038 288 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 NQO2P16083 231 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms