RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 RNF150Q9ULK6 438 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 USF3Q68DE3 2245 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 CD300LBA8K4G0 201 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 HIST1H1BP16401 226 aaKnown RBP13.43□□□□□ -0.26
NPHP4-211ENST00000622020 TUSC5Q8IXB3 177 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 CA5BP1Q8WTZ4 195 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 GATAD1Q8WUU5 269 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 WFIKKN1Q96NZ8 548 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 DUSP23Q9BVJ7 150 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 LOC102723996A0A087X1L8 192 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 KIR2DS1A0A191URI9 304 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 IGKV1-39P01597 117 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 IGKV1D-39P04432 117 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 KIR2DS4P43632 304 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 KIR2DS1Q14954 304 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 C3AR1Q16581 482 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 SNIP1Q8TAD8 396 aaKnown RBP13.42□□□□□ -0.26
NPHP4-211ENST00000622020 HIST1H2AAQ96QV6 131 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 PRR14LQ5THK1 2151 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 SIRPB1O00241 398 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 GALR2O43603 387 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-211ENST00000622020 Q0VFX4 171 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 SPINK9Q5DT21 86 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 LYSMD4Q5XG99 296 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 CYB5R2Q6BCY4 276 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 OR5D13Q8NGL4 314 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 MRPL30Q8TCC3 161 aaKnown RBP13.42□□□□□ -0.26
NPHP4-211ENST00000622020 C1QTNF5Q9BXJ0 243 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 OR14J1Q9UGF5 321 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 MED12LQ86YW9 2145 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 A0A087X0M5 115 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 A0A1B0GX30 115 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 ZNF705GA8MUZ8 300 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-211ENST00000622020 H0Y980 276 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 SYNGR2O43760 224 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 DFFBO76075 338 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 SRD5A2P31213 254 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 ZXDAP98168 799 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 ZFP36L1Q07352 338 aaKnown RBP13.42□□□□□ -0.26
NPHP4-211ENST00000622020 HAPLN4Q86UW8 402 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 HIST1H2BLQ99880 126 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 HES7Q9BYE0 225 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 PCED1AQ9H1Q7 454 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 SLC25A22Q9H936 323 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 SIRT7Q9NRC8 400 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 OR2W1Q9Y3N9 320 aa13.42□□□□□ -0.26
NPHP4-211ENST00000622020 A0A1B0GU03 582 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 DDTP30046 118 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 FOLR3P41439 243 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 SPEM1Q8N4L4 309 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 HLA-CQ95604 372 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 OR4C12Q96R67 309 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 SMIM7Q9BQ49 75 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 ELOVL1Q9BW60 279 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 REPIN1Q9BWE0 567 aaKnown RBP13.41□□□□□ -0.26
NPHP4-211ENST00000622020 LAMP3Q9UQV4 416 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 TRAV24A0A0B4J272 114 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 MAP1LC3B2A6NCE7 125 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 LRRC3CA6NJW4 275 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 PTBP3O95758 552 aaKnown RBP13.41□□□□□ -0.26
NPHP4-211ENST00000622020 CA6P23280 308 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 PRSS8Q16651 343 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 OR2Y1Q8NGV0 311 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 LHX4Q969G2 390 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 MAP1LC3BQ9GZQ8 125 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 SH2D2AQ9NP31 389 aa13.41□□□□□ -0.26
NPHP4-211ENST00000622020 SMCO3A2RU48 225 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 SLC31A2O15432 143 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 ZNF737O75373 536 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 IL2RGP31785 369 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 PMP22Q01453 160 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 FOXO1Q12778 655 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 SSX2Q16385 188 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 SP5Q6BEB4 398 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-211ENST00000622020 H1FOOQ8IZA3 346 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-211ENST00000622020 MISP3Q96FF7 219 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 SDF2L1Q9HCN8 221 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 NCOR1O75376 2440 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 FAM166BA8MTA8 275 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 IFNL4K9M1U5 179 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 CYB5R3P00387 301 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-211ENST00000622020 IGKV1-5P01602 117 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 CEACAM21Q3KPI0 293 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 OR8G5Q8NG78 346 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 OR4X1Q8NH49 305 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 WDR54Q9H977 334 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 PRDM6Q9NQX0 595 aa13.4□□□□□ -0.26
NPHP4-211ENST00000622020 A0A1W2PPQ1 181 aa13.39□□□□□ -0.27
NPHP4-211ENST00000622020 KIAA1324LA8MWY0 1029 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-211ENST00000622020 CLDN1O95832 211 aa13.39□□□□□ -0.27
NPHP4-211ENST00000622020 IGKV1D-33P01593 117 aa13.39□□□□□ -0.27
NPHP4-211ENST00000622020 IGKV1-33P01594 117 aa13.39□□□□□ -0.27
NPHP4-211ENST00000622020 S100GP29377 79 aa13.39□□□□□ -0.27
NPHP4-211ENST00000622020 MDH2P40926 338 aaKnown RBP13.39□□□□□ -0.27
NPHP4-211ENST00000622020 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-211ENST00000622020 ZNF324BQ6AW86 544 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-211ENST00000622020 TCEAL6Q6IPX3 200 aa13.39□□□□□ -0.27
NPHP4-211ENST00000622020 C16orf82Q7Z2V1 217 aa13.39□□□□□ -0.27
NPHP4-211ENST00000622020 REC114Q7Z4M0 266 aa13.39□□□□□ -0.27
NPHP4-211ENST00000622020 ZNF525Q8N782 197 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms