RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 OR51H1Q8NH63 302 aa7.96□□□□□ -1.14
PDPN-212ENST00000621990 KLF14Q8TD94 323 aaPredicted RBP7.96□□□□□ -1.14
PDPN-212ENST00000621990 LIN7CQ9NUP9 197 aaKnown RBP7.96□□□□□ -1.14
PDPN-212ENST00000621990 TRAPPC2LQ9UL33 140 aa7.96□□□□□ -1.14
PDPN-212ENST00000621990 A0A1B0GWJ7 208 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 WRBO00258 174 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 NKX2-8O15522 239 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 NXPH2O95156 264 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 IGKV1-5P01602 117 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 CRYBA1P05813 215 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 C11orf53Q8IXP5 236 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 GCNT2Q8N0V5 402 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 WDR31Q8NA23 367 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 TRIB1Q96RU8 372 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 RFNGQ9Y644 331 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 MLNRO43193 412 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 DFFBO76075 338 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 HAND1O96004 215 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 MPV17P39210 176 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 TAS2R30P59541 319 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 EIF4EBP1Q13541 118 aaPredicted RBP7.95□□□□□ -1.14
PDPN-212ENST00000621990 RHEBQ15382 184 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 AWAT1Q58HT5 328 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 ETV3LQ6ZN32 361 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 STX12Q86Y82 276 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 PRR7Q8TB68 274 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 COA4Q9NYJ1 87 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 KIAA1456Q9P272 454 aa7.95□□□□□ -1.14
PDPN-212ENST00000621990 TRAV39A0A0B4J263 110 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 C7orf77A4D0Y5 90 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 H0YL77 283 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 PSPNO60542 156 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 IGLV1-44P01699 117 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 KITLGP21583 273 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 RPL23AP62750 156 aaKnown RBP7.94□□□□□ -1.14
PDPN-212ENST00000621990 CCL20P78556 96 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 MSMO1Q15800 293 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 IGF2-ASQ6U949 168 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 FIP1L1Q6UN15 594 aaKnown RBP7.94□□□□□ -1.14
PDPN-212ENST00000621990 DRAM1Q8N682 238 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 CLCC1Q96S66 551 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 ABHD14AQ9BUJ0 271 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 TRAV1-1A0A0B4J248 108 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 TRAV17A0A0B4J275 112 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 TMEM30CPA0ZSE6 113 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 CEACAM6P40199 344 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 HOXA1P49639 335 aaPredicted RBP7.94□□□□□ -1.14
PDPN-212ENST00000621990 PAX5Q02548 391 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 SRSF6Q13247 344 aaKnown RBP7.94□□□□□ -1.14
PDPN-212ENST00000621990 RNF212Q495C1 297 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 SLC35E4Q6ICL7 350 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 LINC00518Q8N0U6 118 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 TMEM217Q8N7C4 229 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 C9orf106Q8NAJ2 232 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 ZBTB34Q8NCN2 500 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 KCNJ16Q9NPI9 418 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 PLSCR4Q9NRQ2 329 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 CACNG5Q9UF02 275 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 PPP1R3CQ9UQK1 317 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 FBXO7Q9Y3I1 522 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 MED19A0JLT2 244 aaPredicted RBP7.94□□□□□ -1.14
PDPN-212ENST00000621990 RBFOX3A6NFN3 312 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 RNF212BA8MTL3 300 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 PRR33A8MZF0 331 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 FAM90A26D6RGX4 464 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 SYNGR2O43760 224 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 WISP2O76076 250 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 NXPH3O95157 252 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 FTH1P19P0C7X4 201 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 CCL11P51671 97 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 RUNX1Q01196 453 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 ZNF645Q8N7E2 425 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 RARRES2Q99969 163 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 PARD6GQ9BYG4 376 aaPredicted RBP7.94□□□□□ -1.14
PDPN-212ENST00000621990 CXXC4Q9H2H0 198 aa7.94□□□□□ -1.14
PDPN-212ENST00000621990 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.93□□□□□ -1.14
PDPN-212ENST00000621990 GALR2O43603 387 aaPredicted RBP7.93□□□□□ -1.14
PDPN-212ENST00000621990 GRPP07492 148 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 OR8U8P0C7N1 319 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 P0C879 139 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 WT1P19544 449 aaPredicted RBP7.93□□□□□ -1.14
PDPN-212ENST00000621990 VWA1Q6PCB0 445 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 PRR18Q8N4B5 295 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 FAM169BQ8N8A8 192 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 HIST1H2BAQ96A08 127 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 SARAFQ96BY9 339 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 RBMXL1Q96E39 390 aaKnown RBP7.93□□□□□ -1.14
PDPN-212ENST00000621990 SAV1Q9H4B6 383 aaPredicted RBP7.93□□□□□ -1.14
PDPN-212ENST00000621990 OBP2BQ9NPH6 170 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 RPS10P5Q9NQ39 176 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 TINAGQ9UJW2 476 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 ZNF891A8MT65 544 aaPredicted RBP7.93□□□□□ -1.14
PDPN-212ENST00000621990 C12orf77C9JDV5 145 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 PPIHO43447 177 aaKnown RBP7.93□□□□□ -1.14
PDPN-212ENST00000621990 CEACAM4O75871 244 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 MT-ND4LP03901 98 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 MAS1LP35410 378 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 TLE4Q04727 773 aa7.93□□□□□ -1.14
PDPN-212ENST00000621990 HABP2Q14520 560 aaPredicted RBP7.93□□□□□ -1.14
PDPN-212ENST00000621990 IZUMO4Q1ZYL8 232 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms