RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 SMCO4Q9NRQ5 59 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 POMT1Q9Y6A1 747 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 MED19A0JLT2 244 aaPredicted RBP7.96□□□□□ -1.14
GGA3-223ENST00000621870 ODAMA1E959 279 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 B9A039 149 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 K7N7A8 449 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 CLEC18BQ6UXF7 455 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 DBX2Q6ZNG2 339 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 FAM122BQ7Z309 247 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 FAM219AQ8IW50 185 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 RHOVQ96L33 236 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 ABHD14AQ9BUJ0 271 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 RSRP1Q9BUV0 290 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 Q9N2K0 584 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 RAB18Q9NP72 206 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 ZNF646O15015 1829 aaPredicted RBP7.96□□□□□ -1.14
GGA3-223ENST00000621870 IGHV3-21A0A0B4J1V1 117 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 SYNGR2O43760 224 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 COX5BP10606 129 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 APOBEC3AP31941 199 aaPredicted RBP7.95□□□□□ -1.14
GGA3-223ENST00000621870 NPBWR2P48146 333 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 LYZP61626 148 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 BSPH1Q075Z2 132 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 IL13RA2Q14627 380 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 UBE2V2Q15819 145 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 TMEM41BQ5BJD5 291 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 FAM201AQ5SY85 155 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 ZCCHC24Q8N2G6 241 aaKnown RBP7.95□□□□□ -1.14
GGA3-223ENST00000621870 OR4A4PQ8NGN8 299 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 MARS2Q96GW9 593 aaKnown RBP7.95□□□□□ -1.14
GGA3-223ENST00000621870 PFDN5Q99471 154 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 PRDM14Q9GZV8 571 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 TUBG2Q9NRH3 451 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 KCNK7Q9Y2U2 307 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 TRBV23-1A0A0A0MS06 115 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 PPIAL4CA0A0B4J2A2 164 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 PINLYPA6NC86 204 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 SEMA7AO75326 666 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 PPIAL4GP0DN37 164 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 IGSF11Q5DX21 431 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 ETFRF1Q6IPR1 90 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 ZNRF1Q8ND25 227 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 OR5M8Q8NGP6 311 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 RPS4Y2Q8TD47 263 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 NPAS1Q99742 590 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 SMIM7Q9BQ49 75 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 LINC00470Q9BZP3 86 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 LPAR5Q9H1C0 372 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 AAMDCQ9H7C9 122 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 CLEC5AQ9NY25 188 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 ELOVL5Q9NYP7 299 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 WDR81Q562E7 1941 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 DOCK4Q8N1I0 1966 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 FNDC1Q4ZHG4 1894 aaPredicted RBP7.95□□□□□ -1.14
GGA3-223ENST00000621870 NPIPB13A6NJU9 1138 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 KRBOX1C9JBD0 128 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 NPIPB4C9JG80 1138 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 NDUFA2O43678 99 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 ARG1P05089 322 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 SCTP09683 121 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 G6PCP35575 357 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 KIR2DS2P43631 304 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 RHOBP62745 196 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 IFITM2Q01629 132 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 OR5I1Q13606 314 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 MPPED2Q15777 294 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 C10orf128Q5T292 105 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 FADS6Q8N9I5 356 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 KDF1Q8NAX2 398 aaPredicted RBP7.95□□□□□ -1.14
GGA3-223ENST00000621870 LEAP2Q969E1 77 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 ST6GAL2Q96JF0 529 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 CCL19Q99731 98 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 FAM206AQ9NX38 181 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 DLL3Q9NYJ7 618 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 HIVEP2P31629 2446 aa7.95□□□□□ -1.14
GGA3-223ENST00000621870 RAB29O14966 203 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 CHST1O43916 411 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 IGF2P01344 180 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 AKR1C3P42330 323 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 LHX2P50458 406 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 GFRA1P56159 465 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 TBR1Q16650 682 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 FFAR4Q5NUL3 377 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 CLEC9AQ6UXN8 241 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 OR10A7Q8NGE5 316 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 OR5B3Q8NH48 314 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 ST8SIA2Q92186 375 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 SNX22Q96L94 193 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 PIMREGQ9BSJ6 248 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 GAB2Q9UQC2 676 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 ANKRD36A6QL64 1941 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.94□□□□□ -1.14
GGA3-223ENST00000621870 HAX1O00165 279 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 WNT9BO14905 357 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 MPC2O95563 127 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 FCGR3AP08637 254 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 IGHV1-2P23083 117 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 BMI1P35226 326 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 RPL35P42766 123 aaKnown RBP7.94□□□□□ -1.14
GGA3-223ENST00000621870 ENDOGQ14249 297 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms