RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 DCKP27707 260 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 MPV17LQ2QL34 196 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 VAX1Q5SQQ9 334 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 SYT6Q5T7P8 510 aaPredicted RBP8.96□□□□□ -0.98
CPNE3-210ENST00000621245 GLIPR1L1Q6UWM5 242 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 SLC16A12Q6ZSM3 486 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 TGIF2LXQ8IUE1 241 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 CYGBQ8WWM9 190 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 GGHQ92820 318 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 RITA1Q96K30 269 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 S1PR3Q99500 378 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 ABCG5Q9H222 651 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 MRPS28Q9Y2Q9 187 aaKnown RBP8.96□□□□□ -0.98
CPNE3-210ENST00000621245 ALMS1Q8TCU4 4167 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 H0YHG0 523 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 ORC5O43913 435 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 GPX5O75715 221 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 FSTP19883 344 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 MYF6P23409 242 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 CNTFRP26992 372 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 GP2P55259 537 aaKnown RBP8.95□□□□□ -0.98
CPNE3-210ENST00000621245 RAB25P57735 213 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 Q499Y3 187 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 FAM27D1Q5T7N8 215 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 RAB12Q6IQ22 244 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 TMPRSS11AQ6ZMR5 421 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 SLC25A48Q6ZT89 311 aaKnown RBP8.95□□□□□ -0.98
CPNE3-210ENST00000621245 LINC00596Q86U02 117 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 ZNF695Q8IW36 515 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 ODF3L1Q8IXM7 274 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 GAPTQ8N292 157 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 JAGN1Q8N5M9 183 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 FAM71E2Q8N5Q1 922 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 C8orf31Q8N9H6 132 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 ZNF555Q8NEP9 628 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 OR52M1Q8NGK5 317 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 TFAP2CQ92754 450 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 FAM46BQ96A09 425 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 TMEM80Q96HE8 168 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 DERL3Q96Q80 235 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 MYCBPQ99417 103 aaPredicted RBP8.95□□□□□ -0.98
CPNE3-210ENST00000621245 DCLRE1BQ9H816 532 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 LIN7CQ9NUP9 197 aaKnown RBP8.95□□□□□ -0.98
CPNE3-210ENST00000621245 ETAA1Q9NY74 926 aa8.95□□□□□ -0.98
CPNE3-210ENST00000621245 EXOSC1Q9Y3B2 195 aaKnown RBP8.95□□□□□ -0.98
CPNE3-210ENST00000621245 UBE2QL1A1L167 161 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 CCL24O00175 119 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 DUS4LO95620 317 aaKnown RBP8.94□□□□□ -0.98
CPNE3-210ENST00000621245 MAS1P04201 325 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 SLC2A2P11168 524 aaPredicted RBP8.94□□□□□ -0.98
CPNE3-210ENST00000621245 GTF2F2P13984 249 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 MYL12AP19105 171 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 GZMHP20718 246 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 MYCNOSP40205 109 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 ZNF137PP52743 207 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 ASPHD1Q5U4P2 390 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 AWAT2Q6E213 333 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 FOXRED2Q8IWF2 684 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 OR51D1Q8NGF3 324 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 OR52L2PQ8NGH6 319 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 OR2T10Q8NGZ9 312 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 MRPL30Q8TCC3 161 aaKnown RBP8.94□□□□□ -0.98
CPNE3-210ENST00000621245 RDH12Q96NR8 316 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 PRR25Q96S07 402 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 MRPL20Q9BYC9 149 aaKnown RBP8.94□□□□□ -0.98
CPNE3-210ENST00000621245 SELENOIQ9C0D9 397 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 ZFP57Q9NU63 452 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 PEX16Q9Y5Y5 336 aa8.94□□□□□ -0.98
CPNE3-210ENST00000621245 AP4M1O00189 453 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 SC5DO75845 299 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 MOSP00540 346 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 MGMTP16455 207 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 CD1BP29016 333 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 PPP1CCP36873 323 aaKnown RBP8.93□□□□□ -0.98
CPNE3-210ENST00000621245 SLC35B1P78383 322 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 ST3GAL4Q11206 333 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 LSAMPQ13449 338 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 GPR50Q13585 617 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 YIF1BQ5BJH7 314 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 NKAPLQ5M9Q1 402 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 C6orf141Q5SZD1 244 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 OR10K2Q6IF99 312 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 RNF152Q8N8N0 203 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 S100A13Q99584 98 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 B9D2Q9BPU9 175 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 PARP12Q9H0J9 701 aaKnown RBP8.93□□□□□ -0.98
CPNE3-210ENST00000621245 KLK15Q9H2R5 256 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 GNB4Q9HAV0 340 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 TAF9BQ9HBM6 251 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 GNG12Q9UBI6 72 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 ZNF107Q9UII5 783 aaPredicted RBP8.93□□□□□ -0.98
CPNE3-210ENST00000621245 TRAPPC2LQ9UL33 140 aa8.93□□□□□ -0.98
CPNE3-210ENST00000621245 SORL1Q92673 2214 aa8.92□□□□□ -0.98
CPNE3-210ENST00000621245 MCRIP1C9JLW8 97 aa8.92□□□□□ -0.98
CPNE3-210ENST00000621245 G3V318 75 aa8.92□□□□□ -0.98
CPNE3-210ENST00000621245 ZNF780AO75290 641 aaPredicted RBP8.92□□□□□ -0.98
CPNE3-210ENST00000621245 CRTAPO75718 401 aaPredicted RBP8.92□□□□□ -0.98
CPNE3-210ENST00000621245 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
CPNE3-210ENST00000621245 ADMP35318 185 aa8.92□□□□□ -0.98
CPNE3-210ENST00000621245 OR3A3P47888 321 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms