RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 FAAP20Q6NZ36 180 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 LHFPL4Q7Z7J7 247 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 CATSPERDQ86XM0 798 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 ZDHHC23Q8IYP9 409 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 WFDC9Q8NEX5 89 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 RNF133Q8WVZ7 376 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 HPSE2Q8WWQ2 592 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 ASB17Q8WXJ9 295 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 TMEM106AQ96A25 262 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 ABHD6Q9BV23 337 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 DPCDQ9BVM2 203 aaPredicted RBP6.31□□□□□ -1.4
CLK1-215ENST00000621181 LRP12Q9Y561 859 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 MCRIP1C9JLW8 97 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 TSC22D2O75157 780 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 KDM4BO94953 1096 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 CRYZL1O95825 349 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 CST4P01036 141 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 ARG1P05089 322 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 H2BFMP0C1H6 154 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 RRASP10301 218 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 CCL3L1P16619 93 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 FSTP19883 344 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 VDAC2P45880 294 aaPredicted RBP6.3□□□□□ -1.4
CLK1-215ENST00000621181 SSBP1Q04837 148 aaKnown RBP6.3□□□□□ -1.4
CLK1-215ENST00000621181 GRK1Q15835 563 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 SSX2Q16385 188 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 TMEM95Q3KNT9 176 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 C2orf76Q3KRA6 126 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 NHLRC3Q5JS37 347 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.3□□□□□ -1.4
CLK1-215ENST00000621181 ZNF679Q8IYX0 411 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 ZNF676Q8N7Q3 588 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 OR5AU1Q8NGC0 362 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 OR4D10Q8NGI6 311 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 OR4C16Q8NGL9 310 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 GPX8Q8TED1 209 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 WIPF2Q8TF74 440 aaPredicted RBP6.3□□□□□ -1.4
CLK1-215ENST00000621181 THRSPQ92748 146 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 FOXRED1Q96CU9 486 aaPredicted RBP6.3□□□□□ -1.4
CLK1-215ENST00000621181 WNT10AQ9GZT5 417 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 COMMD4Q9H0A8 199 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 IKZF2Q9UKS7 526 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 SLC22A13Q9Y226 551 aa6.3□□□□□ -1.4
CLK1-215ENST00000621181 TMEM272A0A1B0GTI8 110 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 RFPL4AA6NLU0 287 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 HMSDA8MTL9 139 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 ZNF732B4DXR9 585 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 RFPL4AL1F8VTS6 287 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 F2RL2O00254 374 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 SNAPC5O75971 98 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 DUS4LO95620 317 aaKnown RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 IFNA7P01567 189 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 MAS1P04201 325 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 M6PRP20645 277 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 POU3F4P49335 361 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 BLCAPP62952 87 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 GNG3P63215 75 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 MFGE8Q08431 387 aaPredicted RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 OPCMLQ14982 345 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 SMIM21Q3B7S5 101 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 DMRTC1Q5HYR2 192 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 TMEM200BQ69YZ2 307 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 HAGHLQ6PII5 290 aaPredicted RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 CCDC28AQ8IWP9 274 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 OR8H3Q8N146 312 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 DYNAPQ8N1N2 210 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 ZNF561Q8N587 486 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 C11orf42Q8N5U0 333 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 OR51D1Q8NGF3 324 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 FAM3DQ96BQ1 224 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 MALSU1Q96EH3 234 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 SDSLQ96GA7 329 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 FGF23Q9GZV9 251 aaPredicted RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 ALX4Q9H161 411 aaPredicted RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 UBQLN2Q9UHD9 624 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 WI2-2373I1.2A0A1W2PRP0 233 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 A6NDX4 124 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 FAM90A8PA6NJQ4 464 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 H3BUI4 141 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 SULT1C2O00338 296 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 CREBL2O60519 120 aaPredicted RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 MTRF1O75570 445 aaKnown RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 RBBP9O75884 186 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 ZNF735P0CB33 412 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 H2BFSP57053 126 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 TSPAN5P62079 268 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 ZNF273Q14593 569 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 RBMS2Q15434 407 aaKnown RBP6.29□□□□□ -1.4
CLK1-215ENST00000621181 RAB11BQ15907 218 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 CEACAM21Q3KPI0 293 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 KHDC1LQ5JSQ8 128 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 C1orf100Q5SVJ3 147 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 Q6ZS46 218 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 COMMD2Q86X83 199 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 OR52B4Q8NGK2 314 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 LYZL4Q96KX0 146 aa6.29□□□□□ -1.4
CLK1-215ENST00000621181 OR51I2Q9H344 312 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms