RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 RFESDQ8TAC1 157 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 GALNT14Q96FL9 552 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 BOD1Q96IK1 185 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 GLRX2Q9NS18 164 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 AURKAIP1Q9NWT8 199 aaPredicted RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 PLA2G3Q9NZ20 509 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 CLEC18AA5D8T8 446 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 ANKUB1A6NFN9 424 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 AQP7P3A6NL99 342 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 TRAF3IP2O43734 574 aaPredicted RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 TMEM11P17152 192 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 PMELP40967 661 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 ERVS71-1P61550 626 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 HLA-DRB3P79483 266 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF816Q0VGE8 651 aaPredicted RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 HIKESHIQ53FT3 197 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 CRIP3Q6Q6R5 217 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 CXorf67Q86X51 503 aaPredicted RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 CLEC18CQ8NCF0 446 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 ADPRHL1Q8NDY3 354 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 OR13D1Q8NGV5 346 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 MSI2Q96DH6 328 aaKnown RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 HIPK2Q9H2X6 1198 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 PNRC2Q9NPJ4 139 aaKnown RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 PSENENQ9NZ42 101 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 FBLN5Q9UBX5 448 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 FOXD3Q9UJU5 478 aaPredicted RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 INTS1Q8N201 2190 aaKnown RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 C3orf85A0A1B0GTC6 90 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 ST8SIA5O15466 376 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 TMEM50AO95807 157 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 ICAM4Q14773 271 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 OR8G1Q15617 311 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 NCR3LG1Q68D85 454 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 OR10P1Q8NGE3 313 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 PP6455Q8WZ26 134 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 FAM103A1Q9BTL3 118 aaKnown RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 VSIRQ9H7M9 311 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 SLC7A10Q9NS82 523 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 TCFL5Q9UL49 500 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 DCHS1Q96JQ0 3298 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 IGKV1-27A0A075B6S5 117 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 UBE2L5PA0A1B0GUS4 154 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 A0A1W2PQM1 296 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 LNP1A1A4G5 178 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF320A2RRD8 509 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 SPINK4O60575 86 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 IGHV3-13P01766 116 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 IGHV3-7P01780 117 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 METTL15P1P0C7V9 234 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF32P17041 273 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 SUMO3P55854 103 aaPredicted RBP6□□□□□ -1.45
NEDD9-216ENST00000620854 CT55Q8WUE5 264 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 HIST1H2BLQ99880 126 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 GTF3C1Q12789 2109 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 PTPRSQ13332 1948 aa6□□□□□ -1.45
NEDD9-216ENST00000620854 TRAV39A0A0B4J263 110 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 B4E171 279 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 MKRN2OSH3BPM6 223 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 TCAPO15273 167 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 SPINT2O43291 252 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 TSPAN7P41732 249 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 NPBWR2P48146 333 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF90Q03938 601 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 RBPJQ06330 500 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 ZP4Q12836 540 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 IL13RA2Q14627 380 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF66Q6ZN08 573 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 LHFPL2Q6ZUX7 228 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 TBC1D26Q86UD7 250 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 H1FXQ92522 213 aaKnown RBP5.99□□□□□ -1.45
NEDD9-216ENST00000620854 Q96M66 194 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 FOXB1Q99853 325 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 RYDENQ9NUL5 291 aaKnown RBP5.99□□□□□ -1.45
NEDD9-216ENST00000620854 ERRFI1Q9UJM3 462 aaPredicted RBP5.99□□□□□ -1.45
NEDD9-216ENST00000620854 MED13LQ71F56 2210 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 SLC31A2O15432 143 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 GALR2O43603 387 aaPredicted RBP5.99□□□□□ -1.45
NEDD9-216ENST00000620854 CBR3O75828 277 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 GLIPR1P48060 266 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 RTP5Q14D33 572 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 OR8B8Q15620 311 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 RSPO1Q2MKA7 263 aaPredicted RBP5.99□□□□□ -1.45
NEDD9-216ENST00000620854 ARSJQ5FYB0 599 aaPredicted RBP5.99□□□□□ -1.45
NEDD9-216ENST00000620854 REC114Q7Z4M0 266 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 GAPTQ8N292 157 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 KCNE4Q8WWG9 221 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 ADGRG7Q96K78 797 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 AKIRIN1Q9H9L7 192 aaPredicted RBP5.99□□□□□ -1.45
NEDD9-216ENST00000620854 MTCH1Q9NZJ7 389 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 ANAPC10Q9UM13 185 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 ZFHX4Q86UP3 3567 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 OR7C2O60412 319 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 PTBP3O95758 552 aaKnown RBP5.99□□□□□ -1.45
NEDD9-216ENST00000620854 PPYP01298 95 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 CTXN2P0C2S0 81 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 CD33P20138 364 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 GALNSP34059 522 aa5.99□□□□□ -1.45
NEDD9-216ENST00000620854 PKIAP61925 76 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms