RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 DHRS7CA6NNS2 312 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 FCN1O00602 326 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 MPV17P39210 176 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 KIR3DL2P43630 455 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 FGF12P61328 243 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 SLC25A47Q6Q0C1 308 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 TEPPQ6URK8 271 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 GZMKP49863 264 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 DCAF12L2Q5VW00 463 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 TMEM116Q8NCL8 245 aa9.85□□□□□ -0.83
CLIP1-219ENST00000620786 TRBV5-3A0A0A0MS03 114 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 A0A1B0GU03 582 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 TMEM88Q6PEY1 159 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 CENPVQ7Z7K6 275 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-219ENST00000620786 C10orf111Q8N326 155 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 SNRNP40Q96DI7 357 aaKnown RBP9.84□□□□□ -0.83
CLIP1-219ENST00000620786 C16orf92Q96LL3 132 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 ABHD1Q96SE0 405 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 TAF1LQ8IZX4 1826 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 B9A039 149 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 SYNGR3O43761 229 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 ICMTO60725 284 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 AANATQ16613 207 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 TEX261Q6UWH6 196 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 SEZ6L2Q6UXD5 910 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 CALHM1Q8IU99 346 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 ADAD2Q8NCV1 583 aaKnown RBP9.84□□□□□ -0.83
CLIP1-219ENST00000620786 ABHD14BQ96IU4 210 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 TIMP4Q99727 224 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 U3KQ87 197 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 A0A1W2PS18 150 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 COL8A1P27658 744 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 ZNF137PP52743 207 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 OR4A5Q8NH83 315 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 KLF14Q8TD94 323 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-219ENST00000620786 C11orf94C9JXX5 98 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 SS18L1O75177 396 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-219ENST00000620786 FCGR3AP08637 254 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 AREGP15514 252 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 HIST1H3AP68431 136 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 MOGAT2Q3SYC2 334 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 TM4SF20Q53R12 229 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 WNK3Q9BYP7 1800 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 LRRC37AA6NMS7 1700 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 FOXH1O75593 365 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 USF1P22415 310 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-219ENST00000620786 B2MP61769 119 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 UQCC3Q6UW78 93 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 PRSS27Q9BQR3 290 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 DCAF16Q9NXF7 216 aa9.84□□□□□ -0.83
CLIP1-219ENST00000620786 RBBP6Q7Z6E9 1792 aaKnown RBP9.84□□□□□ -0.83
CLIP1-219ENST00000620786 ALX3O95076 343 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 ACSF3Q4G176 576 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-219ENST00000620786 SLC25A53Q5H9E4 307 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 LYZL2Q7Z4W2 148 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 EIF4E3Q8N5X7 224 aaKnown RBP9.83□□□□□ -0.84
CLIP1-219ENST00000620786 OR10J6PQ8NGY7 276 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 SIGLEC12Q96PQ1 595 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 LAMTOR1Q6IAA8 161 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 ZNF645Q8N7E2 425 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 SPSB2Q99619 263 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 GPA33Q99795 319 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 RPL7P18124 248 aaKnown RBP9.83□□□□□ -0.84
CLIP1-219ENST00000620786 APOBEC3AP31941 199 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-219ENST00000620786 LTBRP36941 435 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 NUBP1P53384 320 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 ZNF66Q6ZN08 573 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 CROCCQ5TZA2 2017 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 WDR90Q96KV7 1748 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 C4orf51C9J302 202 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 RHBDL1O75783 438 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 FAM157CP0CG43 387 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 SULT1A1P50225 295 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 RIGQ13278 110 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 TMEM37Q8WXS4 190 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 SOSTQ9BQB4 213 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 ST6GALNAC2Q9UJ37 374 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 CSN3P07498 182 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 TCL1AP56279 114 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 SNAI3Q3KNW1 292 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 PRNTQ86SH4 94 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 HOGA1Q86XE5 327 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 KLHDC1Q8N7A1 406 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 SCARF2Q96GP6 870 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-219ENST00000620786 MS4A10Q96PG2 267 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 SLC35B3Q9H1N7 401 aa9.83□□□□□ -0.84
CLIP1-219ENST00000620786 EFNB2P52799 333 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 RAG2P55895 527 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 ATP5G2Q06055 141 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 WDR73Q6P4I2 378 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 ABHD12Q8N2K0 398 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 ZNF561Q8N587 486 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 STXBP6Q8NFX7 210 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 OR4C12Q96R67 309 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 WNT9BO14905 357 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 HYPMO75409 117 aa9.82□□□□□ -0.84
CLIP1-219ENST00000620786 SRSF10O75494 262 aaKnown RBP9.82□□□□□ -0.84
CLIP1-219ENST00000620786 CRHP06850 196 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms