RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ZNF665Q9H7R5 613 aa11.1□□□□□ -0.63
SKP2-209ENST00000620197 TIMM9Q9Y5J7 89 aa11.1□□□□□ -0.63
SKP2-209ENST00000620197 SLC31A2O15432 143 aa11.1□□□□□ -0.63
SKP2-209ENST00000620197 FABP4P15090 132 aa11.1□□□□□ -0.63
SKP2-209ENST00000620197 NDUFB7P17568 137 aa11.1□□□□□ -0.63
SKP2-209ENST00000620197 IL2RGP31785 369 aa11.1□□□□□ -0.63
SKP2-209ENST00000620197 STX12Q86Y82 276 aa11.1□□□□□ -0.63
SKP2-209ENST00000620197 DEGS1O15121 323 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 SYNGR1O43759 233 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 IFNA10P01566 189 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 OPN1MWP04001 364 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 OPN1MW2P0DN77 364 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 OPN1MW3P0DN78 364 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 CEBPGP53567 150 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 TMEM267Q0VDI3 215 aaPredicted RBP11.09□□□□□ -0.63
SKP2-209ENST00000620197 TMEM41BQ5BJD5 291 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 SPIN3Q5JUX0 258 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 PPP1R32Q7Z5V6 425 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 MRGPRGQ86SM5 289 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 MKXQ8IYA7 352 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
SKP2-209ENST00000620197 ZNF552Q9H707 407 aaPredicted RBP11.09□□□□□ -0.63
SKP2-209ENST00000620197 VAX2Q9UIW0 290 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 ESPL1Q14674 2120 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 C1QTNF9BB2RNN3 333 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 TAS2R60P59551 318 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 NKX6-1P78426 367 aaPredicted RBP11.09□□□□□ -0.63
SKP2-209ENST00000620197 TRA2AQ13595 282 aaKnown RBP eCLIP11.09□□□□□ -0.63
SKP2-209ENST00000620197 TMEM14EPQ6UXP3 125 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 BATF2Q8N1L9 274 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 POM121L2Q96KW2 1035 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 GNG13Q9P2W3 67 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 CABIN1Q9Y6J0 2220 aa11.09□□□□□ -0.63
SKP2-209ENST00000620197 LRP5LA4QPB2 252 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 IGKV1D-33P01593 117 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 IGKV1-33P01594 117 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 ZNF787Q6DD87 383 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 PILRBQ9UKJ0 227 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 PMS2P5A8MQ11 134 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 C9J4A7 227 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 MDH2P40926 338 aaKnown RBP11.08□□□□□ -0.64
SKP2-209ENST00000620197 CYP2G1PQ6ZSU1 146 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 TGIF2LYQ8IUE0 185 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 TMEM183AQ8IXX5 376 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 PACRGQ96M98 296 aaPredicted RBP11.08□□□□□ -0.64
SKP2-209ENST00000620197 PRO1933Q9H354 126 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 SRD5A3Q9H8P0 318 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 KIAA2026Q5HYC2 2103 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 MAP1BP46821 2468 aaKnown RBP11.08□□□□□ -0.64
SKP2-209ENST00000620197 A0A087X0M5 115 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 A0A1B0GX30 115 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 TNFSF12O43508 249 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 SYNGR2O43760 224 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 IL18BPO95998 194 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 PGA5P0DJD9 388 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 VWC2Q2TAL6 325 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 PEAR1Q5VY43 1037 aaPredicted RBP11.08□□□□□ -0.64
SKP2-209ENST00000620197 OR4X1Q8NH49 305 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 IFI44Q8TCB0 444 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 APOBEC3DQ96AK3 386 aaPredicted RBP11.08□□□□□ -0.64
SKP2-209ENST00000620197 S100PBPQ96BU1 408 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 C2orf88Q9BSF0 95 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 PKIBQ9C010 78 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 PITPNC1Q9UKF7 332 aa11.08□□□□□ -0.64
SKP2-209ENST00000620197 FAM90A26D6RGX4 464 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 NXPH3O95157 252 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 LHX2P50458 406 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 ZNF497Q6ZNH5 498 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 ACTR3CQ9C0K3 210 aaPredicted RBP11.07□□□□□ -0.64
SKP2-209ENST00000620197 OR51I2Q9H344 312 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 GP6Q9HCN6 339 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 MBNL3Q9NUK0 354 aaKnown RBP11.07□□□□□ -0.64
SKP2-209ENST00000620197 LILRA1O75019 489 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 GZMBP10144 247 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 ERVK11-1P61568 191 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 RAB11AP62491 216 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 HLA-BQ31612 363 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 WIPI1Q5MNZ9 446 aaPredicted RBP11.07□□□□□ -0.64
SKP2-209ENST00000620197 MISP3Q96FF7 219 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 DLL3Q9NYJ7 618 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 OR1A1Q9P1Q5 309 aa11.07□□□□□ -0.64
SKP2-209ENST00000620197 FAM186AA6NE01 2351 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 A8MWP6 167 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 DVL1O14640 695 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 CD55P08174 381 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 CCL4P13236 92 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 APLNRP35414 380 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 CLDN18P56856 261 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 RPS18P62269 152 aaKnown RBP11.06□□□□□ -0.64
SKP2-209ENST00000620197 ARF1P84077 181 aaKnown RBP11.06□□□□□ -0.64
SKP2-209ENST00000620197 JOSD1Q15040 202 aaPredicted RBP11.06□□□□□ -0.64
SKP2-209ENST00000620197 RPP25LQ8N5L8 163 aaKnown RBP11.06□□□□□ -0.64
SKP2-209ENST00000620197 OR10V1Q8NGI7 309 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 OR51G1Q8NGK1 321 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 RBKSQ9H477 322 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 WIPI2Q9Y4P8 454 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 CNOT4O95628 575 aaKnown RBP11.06□□□□□ -0.64
SKP2-209ENST00000620197 IFNA5P01569 189 aa11.06□□□□□ -0.64
SKP2-209ENST00000620197 IZUMO4Q1ZYL8 232 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms