RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	CDH20	Q9HBT6	801 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	LYRM2	Q9NU23	88 aa	Predicted RBP	12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	PPP1R3C	Q9UQK1	317 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	HBE1	P02100	147 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	UCP3	P55916	312 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	MPV17L	Q2QL34	196 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	NBEA	Q8NFP9	2946 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	RSG1	Q9BU20	258 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	MTCH1	Q9NZJ7	389 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	LRFN1	Q9P244	771 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	TRBV24-1	A0A075B6N3	115 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	IFNA5	P01569	189 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	S100G	P29377	79 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644		Q0VFX4	171 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	SLC10A1	Q14973	349 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	HERPUD1	Q15011	391 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	OR8B8	Q15620	311 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	C12orf49	Q9H741	205 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644		Q9N2K0	584 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	TMEM242	Q9NWH2	141 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	NCKAP5	O14513	1909 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	VDAC1	P21796	283 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	TNFRSF9	Q07011	255 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	PNRC1	Q12796	327 aa	Predicted RBP	12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	ASCL4	Q6XD76	172 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	OR1P1	Q8NH06	330 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	HLA-C	Q95604	372 aa		12.36	□□□□□ -0.43
SMTN-223	ENST00000619644	METTL15P1	P0C7V9	234 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	PSG2	P11465	335 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	ZFP36L1	Q07352	338 aa	Known RBP	12.35	□□□□□ -0.43
SMTN-223	ENST00000619644		Q6ZSR3	168 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	OR10J5	Q8NHC4	309 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	THOC3	Q96J01	351 aa	Known RBP	12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	LRRC3C	A6NJW4	275 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	OPN1MW	P04001	364 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	OPN1MW2	P0DN77	364 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	OPN1MW3	P0DN78	364 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	COL10A1	Q03692	680 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	TRIM61	Q5EBN2	209 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	C20orf204	Q6ZNR8	217 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	LINC00696	Q6ZRV3	163 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	ODF3L1	Q8IXM7	274 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	FAM185A	Q8N0U4	392 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	OR10A7	Q8NGE5	316 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	OR10G4	Q8NGN3	311 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	OR1K1	Q8NGR3	316 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	SCGB1C1	Q8TD33	95 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	ZNF391	Q9UJN7	358 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	PILRB	Q9UKJ0	227 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	GAB2	Q9UQC2	676 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	ARHGAP21	Q5T5U3	1957 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644		A0A0G2JRQ6	117 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	ELL	P55199	621 aa	Predicted RBP	12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	PLA2G3	Q9NZ20	509 aa		12.35	□□□□□ -0.43
SMTN-223	ENST00000619644	KIR2DS1	A0A191URI9	304 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	HMGB3	O15347	200 aa	Known RBP	12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	WDR1	O75083	606 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	PDGFB	P01127	241 aa	Predicted RBP	12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	KIR2DS4	P43632	304 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	KIR2DS1	Q14954	304 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	FGF23	Q9GZV9	251 aa	Predicted RBP	12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	DOCK10	Q96BY6	2186 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	DOCK11	Q5JSL3	2073 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	IGKV1-6	A0A0C4DH72	117 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	LILRA1	O75019	489 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	PGLYRP1	O75594	196 aa	Predicted RBP	12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	DFFB	O76075	338 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	MMP7	P09237	267 aa	Predicted RBP	12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	MMP9	P14780	707 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	FGF12	P61328	243 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	RPS16	P62249	146 aa	Known RBP	12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	PPP1R32	Q7Z5V6	425 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	SH2D2A	Q9NP31	389 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	IL36G	Q9NZH8	169 aa		12.34	□□□□□ -0.43
SMTN-223	ENST00000619644	MAP1B	P46821	2468 aa	Known RBP	12.34	□□□□□ -0.43
SMTN-223	ENST00000619644		A0A1W2PR80	420 aa		12.33	□□□□□ -0.43
SMTN-223	ENST00000619644	CD55	P08174	381 aa		12.33	□□□□□ -0.43
SMTN-223	ENST00000619644	WDR25	Q64LD2	544 aa	Predicted RBP	12.33	□□□□□ -0.43
SMTN-223	ENST00000619644	PMS2CL	Q68D20	193 aa		12.33	□□□□□ -0.43
SMTN-223	ENST00000619644	SNHG12	Q9BXW3	62 aa		12.33	□□□□□ -0.43
SMTN-223	ENST00000619644	ZNF665	Q9H7R5	613 aa		12.33	□□□□□ -0.43
SMTN-223	ENST00000619644	SDF2L1	Q9HCN8	221 aa		12.33	□□□□□ -0.43
SMTN-223	ENST00000619644	CACNG5	Q9UF02	275 aa		12.33	□□□□□ -0.43
SMTN-223	ENST00000619644	XKRY2	A2RUG3	117 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	ZNF503-AS2	A6NEH8	195 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	SIRPB1	O00241	398 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	TUSC2	O75896	110 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	CA6	P23280	308 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	PLGLB1	Q02325	96 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	PLP2	Q04941	152 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	DAZAP2	Q15038	168 aa	Predicted RBP	12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	P2RY6	Q15077	328 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	MCEMP1	Q8IX19	187 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	TMEM56	Q96MV1	263 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	C1QTNF5	Q9BXJ0	243 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	PLK3	Q9H4B4	646 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	OR1A1	Q9P1Q5	309 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	TMEM56-RWDD3	S4R434	201 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms