RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 RPS11P62280 158 aaKnown RBP eCLIP9.37□□□□□ -0.91
UPF3B-204ENST00000619445 HTD2P86397 168 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 ST3GAL4Q11206 333 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 ZNF485Q8NCK3 441 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 ZNF439Q8NDP4 499 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 C4orf3Q8WVX3 66 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 OR14A2Q96R54 314 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 SELENOIQ9C0D9 397 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 OR2S2Q9NQN1 319 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 PLSCR3Q9NRY6 295 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 MBNL3Q9NUK0 354 aaKnown RBP9.37□□□□□ -0.91
UPF3B-204ENST00000619445 ZNF581Q9P0T4 197 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 LINC00527Q9UJ94 153 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 JPT1Q9UK76 154 aa9.37□□□□□ -0.91
UPF3B-204ENST00000619445 SORL1Q92673 2214 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 TRAV8-7A0A075B6U6 113 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 IGHV3-43A0A0B4J1X8 118 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 A0A1W2PP11 408 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 PDCD6O75340 191 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 CRTAPO75718 401 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-204ENST00000619445 LALBAP00709 142 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 RPLP1P05386 114 aaKnown RBP9.36□□□□□ -0.91
UPF3B-204ENST00000619445 IGHV3-43DP0DP04 118 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 RANBP1P43487 201 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 INSL3P51460 131 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 WNT4P56705 351 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 RAB25P57735 213 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 CT45A1Q5HYN5 189 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 C8orf59Q8N0T1 100 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-204ENST00000619445 PRR18Q8N4B5 295 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 MS4A15Q8N5U1 240 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 OR13C5Q8NGS8 318 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 CT45A3Q8NHU0 189 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 RAX2Q96IS3 184 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 Q96M66 194 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 WWC2-AS2Q96NR7 200 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 DERL3Q96Q80 235 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 ABHD14AQ9BUJ0 271 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 GHITMQ9H3K2 345 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 TAF9BQ9HBM6 251 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 CLEC2DQ9UHP7 191 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 ZNF107Q9UII5 783 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-204ENST00000619445 ERGIC3Q9Y282 383 aa9.36□□□□□ -0.91
UPF3B-204ENST00000619445 MAS1P04201 325 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 CELP19835 753 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 CFHR3Q02985 330 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 LSAMPQ13449 338 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 MMDQ15546 238 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 MORN2Q502X0 79 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 FAM71F2Q6NXP2 309 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 TMEM65Q6PI78 240 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 LCNL1Q6ZST4 164 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 OR4K15Q8NH41 348 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 GGHQ92820 318 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 GALMQ96C23 342 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 NEDD4LQ96PU5 975 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 PLCXD1Q9NUJ7 323 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 ABRACLQ9P1F3 81 aa9.35□□□□□ -0.91
UPF3B-204ENST00000619445 MAGEA13PA6NCF6 341 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 ERICH4A6NGS2 130 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 LINC01548A6NM66 108 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 YPEL1O60688 119 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 HLA-DRB1P01911 266 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 OR8U8P0C7N1 319 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 RCC1P18754 421 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-204ENST00000619445 PSMB8P28062 276 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 VHLP40337 213 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 ZNF134P52741 427 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 ADARB1P78563 741 aaKnown RBP9.34□□□□□ -0.91
UPF3B-204ENST00000619445 GLT8D1Q68CQ7 371 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 MOB1BQ7L9L4 216 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 OR2AK2Q8NG84 335 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 OR10V1Q8NGI7 309 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 OR1L1Q8NH94 360 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 UBALD1Q8TB05 177 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 PHYHIPQ92561 330 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 TFAP2CQ92754 450 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 ORAI1Q96D31 301 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 UBE2E2Q96LR5 201 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 KCTD7Q96MP8 289 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 YPEL2Q96QA6 119 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 VCXQ9H320 206 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 RIMS4Q9H426 269 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-204ENST00000619445 BANF2Q9H503 90 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 KIAA1456Q9P272 454 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 STEAP1Q9UHE8 339 aa9.34□□□□□ -0.91
UPF3B-204ENST00000619445 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 SLC31A2O15432 143 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 ACTBP60709 375 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 RUNX1Q01196 453 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 FHL3Q13643 280 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 LRRC36Q1X8D7 754 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 C18orf65Q6ZTR6 163 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 LYPD6Q86Y78 171 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 TCTEX1D1Q8N7M0 179 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 ZFP41Q8N8Y5 198 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 KCNG3Q8TAE7 436 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 PIPOXQ9P0Z9 390 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms