RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 OPA3Q9H6K4 179 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 PSENENQ9NZ42 101 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 OR14J1Q9UGF5 321 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 MRPS18CQ9Y3D5 142 aaKnown RBP17.33■□□□□ 0.37
NEK3-208ENST00000618534 IGKV1-5P01602 117 aa17.33■□□□□ 0.36
NEK3-208ENST00000618534 IGLV2-14P01704 120 aa17.33■□□□□ 0.36
NEK3-208ENST00000618534 RND2P52198 227 aa17.33■□□□□ 0.36
NEK3-208ENST00000618534 PNRC1Q12796 327 aaPredicted RBP17.33■□□□□ 0.36
NEK3-208ENST00000618534 IGFBP7Q16270 282 aa17.33■□□□□ 0.36
NEK3-208ENST00000618534 FAM180AQ6UWF9 173 aa17.33■□□□□ 0.36
NEK3-208ENST00000618534 MBD3L1Q8WWY6 194 aa17.33■□□□□ 0.36
NEK3-208ENST00000618534 DLL3Q9NYJ7 618 aa17.33■□□□□ 0.36
NEK3-208ENST00000618534 SIT1Q9Y3P8 196 aa17.33■□□□□ 0.36
NEK3-208ENST00000618534 CLDN34H7C241 214 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 CELA3AP09093 270 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 C4orf17Q53FE4 359 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 SPINK14Q6IE38 97 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 LINC00596Q86U02 117 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 LRFN1Q9P244 771 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 PPP1R3CQ9UQK1 317 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 CHD3Q12873 2000 aaKnown RBP17.32■□□□□ 0.36
NEK3-208ENST00000618534 PCSK5Q92824 1860 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 ELOA3CA0A087WX78 387 aaPredicted RBP17.32■□□□□ 0.36
NEK3-208ENST00000618534 NDUFS6O75380 124 aaKnown RBP17.32■□□□□ 0.36
NEK3-208ENST00000618534 TCEAL6Q6IPX3 200 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 FAM58AQ8N1B3 248 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 PSMG3Q9BT73 122 aaPredicted RBP17.32■□□□□ 0.36
NEK3-208ENST00000618534 PRDM13Q9H4Q3 707 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 SDF2L1Q9HCN8 221 aa17.32■□□□□ 0.36
NEK3-208ENST00000618534 PATE3B3GLJ2 98 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 IGHEP01854 428 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 COX5BP10606 129 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 PRR18Q8N4B5 295 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 LSM10Q969L4 123 aaKnown RBP17.31■□□□□ 0.36
NEK3-208ENST00000618534 POM121L2Q96KW2 1035 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 OR51B6Q9H340 312 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 TMEM242Q9NWH2 141 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 RHBDL1O75783 438 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 MDH2P40926 338 aaKnown RBP17.31■□□□□ 0.36
NEK3-208ENST00000618534 LILRB2Q8N423 598 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 OR1K1Q8NGR3 316 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 UBALD1Q8TB05 177 aa17.31■□□□□ 0.36
NEK3-208ENST00000618534 CEBPZOSA8MTT3 80 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 DEGS1O15121 323 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 ZNF16P17020 682 aaPredicted RBP17.3■□□□□ 0.36
NEK3-208ENST00000618534 LHX2P50458 406 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 ESPL1Q14674 2120 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 TESK1Q15569 626 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 LRRC75BQ2VPJ9 315 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 RNF150Q9ULK6 438 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 DOCK10Q96BY6 2186 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 OR5H1A6NKK0 313 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 ANKRD30BLA7E2S9 258 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 PTBP3O95758 552 aaKnown RBP17.3■□□□□ 0.36
NEK3-208ENST00000618534 FABP4P15090 132 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 ELLP55199 621 aaPredicted RBP17.3■□□□□ 0.36
NEK3-208ENST00000618534 ZNF573Q86YE8 665 aa17.3■□□□□ 0.36
NEK3-208ENST00000618534 DMDP11532 3685 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 PIGBOS1A0A0B4J2F0 54 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 PHOX2AO14813 284 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 WNT2P09544 360 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 HIST1H1BP16401 226 aaKnown RBP17.29■□□□□ 0.36
NEK3-208ENST00000618534 MDKP21741 143 aaPredicted RBP17.29■□□□□ 0.36
NEK3-208ENST00000618534 ZNF585BQ52M93 769 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 MYPOPQ86VE0 399 aaPredicted RBP17.29■□□□□ 0.36
NEK3-208ENST00000618534 VAX2Q9UIW0 290 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 KCNS2Q9ULS6 477 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 BOKQ9UMX3 212 aaPredicted RBP17.29■□□□□ 0.36
NEK3-208ENST00000618534 MAP1LC3B2A6NCE7 125 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 LY86O95711 162 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 PGA5P0DJD9 388 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 GNG3P63215 75 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 HBG1P69891 147 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 HBG2P69892 147 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 TMEM41BQ5BJD5 291 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 SPANXN5Q5MJ07 72 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 P2RX4Q99571 388 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 MAP1LC3BQ9GZQ8 125 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 RBKSQ9H477 322 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 GFOD1Q9NXC2 390 aa17.29■□□□□ 0.36
NEK3-208ENST00000618534 SERPINA7P05543 415 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 GPX4P36969 197 aaPredicted RBP17.28■□□□□ 0.36
NEK3-208ENST00000618534 PLA2G5P39877 138 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 CLDN18P56856 261 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 SERF2P84101 59 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 DEFA6Q01524 100 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 BEND4Q6ZU67 534 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 OR4C12Q96R67 309 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 WDR61Q9GZS3 305 aaKnown RBP17.28■□□□□ 0.36
NEK3-208ENST00000618534 RBM7Q9Y580 266 aaKnown RBP17.28■□□□□ 0.36
NEK3-208ENST00000618534 NPIPB11E5RHQ5 1161 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.28■□□□□ 0.36
NEK3-208ENST00000618534 YKT6O15498 198 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 WNT5AP41221 380 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 MRGPRGQ86SM5 289 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 MAFAQ8NHW3 353 aaPredicted RBP17.28■□□□□ 0.36
NEK3-208ENST00000618534 CT55Q8WUE5 264 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 SNX22Q96L94 193 aa17.28■□□□□ 0.36
NEK3-208ENST00000618534 ZNF703Q9H7S9 590 aaPredicted RBP17.28■□□□□ 0.36
NEK3-208ENST00000618534 R4GN57 208 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms