RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 STEAP1Q9UHE8 339 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 SMIM30A4D0T7 59 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 M0QZ24 198 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 SOCS1O15524 211 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 OR2F2O95006 317 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 SNRNP70P08621 437 aaKnown RBP12.78□□□□□ -0.36
BRCA1-228ENST00000618469 RAB3BP20337 219 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 GALP22466 123 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 IL3RAP26951 378 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 BLCAPP62952 87 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 GNMTQ14749 295 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 NEDD8Q15843 81 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 Q3ZCU0 254 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 Q6ZTK2 550 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 OR8H3Q8N146 312 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 Q8N2B8 174 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 LINC00311Q8N616 119 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 C8orf31Q8N9H6 132 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 ZNF439Q8NDP4 499 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 SETD6Q8TBK2 473 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 CFHR4Q92496 578 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 OCSTAMPQ9BR26 566 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 MMP27Q9H306 513 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 OR2S2Q9NQN1 319 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 SERTAD4Q9NUC0 356 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
BRCA1-228ENST00000618469 TET2Q6N021 2002 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-228ENST00000618469 NBEAL2Q6ZNJ1 2754 aa12.77□□□□□ -0.36
BRCA1-228ENST00000618469 TMEM272A0A1B0GTI8 110 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 PEX14O75381 377 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 PRB2P02812 416 aaPredicted RBP12.77□□□□□ -0.37
BRCA1-228ENST00000618469 FAM106CPP0CH98 169 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 RANBP1P43487 201 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 VDAC2P45880 294 aaPredicted RBP12.77□□□□□ -0.37
BRCA1-228ENST00000618469 VEGFCP49767 419 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 ZNF816Q0VGE8 651 aaPredicted RBP12.77□□□□□ -0.37
BRCA1-228ENST00000618469 PLA2G7Q13093 441 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 HES1Q14469 280 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 HERPUD1Q15011 391 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 HMGN3Q15651 99 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 C2orf76Q3KRA6 126 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 Q6ZS46 218 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 MOB1BQ7L9L4 216 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 C5orf24Q7Z6I8 188 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 ZNF554Q86TJ5 538 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 C11orf44Q8N8P7 122 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 RBM14Q96PK6 669 aaKnown RBP12.77□□□□□ -0.37
BRCA1-228ENST00000618469 TXNL4BQ9NX01 149 aaKnown RBP12.77□□□□□ -0.37
BRCA1-228ENST00000618469 AK3Q9UIJ7 227 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 JPT1Q9UK76 154 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 MOB4Q9Y3A3 225 aa12.77□□□□□ -0.37
BRCA1-228ENST00000618469 A0A0B4J203 849 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 IGHV1-3A0A0C4DH29 117 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 IFITM5A6NNB3 132 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 FOXI3A8MTJ6 420 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-228ENST00000618469 LDLRAD4O15165 306 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 NAPSAO96009 420 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 IGKV1D-33P01593 117 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 IGKV1-33P01594 117 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 GAPDHP04406 335 aaKnown RBP12.76□□□□□ -0.37
BRCA1-228ENST00000618469 TMEM11P17152 192 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 PPP1CCP36873 323 aaKnown RBP12.76□□□□□ -0.37
BRCA1-228ENST00000618469 ABCA11PQ4W5N1 156 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 Q6ZPA2 131 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 SLC25A48Q6ZT89 311 aaKnown RBP12.76□□□□□ -0.37
BRCA1-228ENST00000618469 MOB3BQ86TA1 216 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 FAM89BQ8N5H3 189 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 OR52L2PQ8NGH6 319 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 OR56B1Q8NGI3 324 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 FAM110DQ8TAY7 271 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-228ENST00000618469 ARHGAP5-AS1Q96IT6 56 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 HDHD3Q9BSH5 251 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-228ENST00000618469 ABRACLQ9P1F3 81 aa12.76□□□□□ -0.37
BRCA1-228ENST00000618469 IGHV3-72A0A0B4J1Y9 119 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 SH2D7A6NKC9 451 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-228ENST00000618469 FAM90A9PA6NNJ1 464 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 TSPAN15O95858 294 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 LPLP06858 475 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 FGF9P31371 208 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-228ENST00000618469 CT45A1Q5HYN5 189 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 LYG1Q8N1E2 194 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 CT45A3Q8NHU0 189 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 RTN4IP1Q8WWV3 396 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-228ENST00000618469 IL1F10Q8WWZ1 152 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 GALMQ96C23 342 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 ABHD14AQ9BUJ0 271 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 PECRQ9BY49 303 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 OR51E2Q9H255 320 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 C12orf4Q9NQ89 552 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 RAB22AQ9UL26 194 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 HSF4Q9ULV5 492 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 SSR3Q9UNL2 185 aa12.75□□□□□ -0.37
BRCA1-228ENST00000618469 FBXO24O75426 580 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 ZNF134P52741 427 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 HTD2P86397 168 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 HNF4GQ14541 408 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 C2orf68Q2NKX9 166 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 MORN2Q502X0 79 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms