RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ZAR1LA6NP61 321 aa9.32□□□□□ -0.92
POLR2A-209ENST00000617998 SNURFLB1AK76 121 aa9.32□□□□□ -0.92
POLR2A-209ENST00000617998 MOSP00540 346 aa9.32□□□□□ -0.92
POLR2A-209ENST00000617998 HBE1P02100 147 aa9.32□□□□□ -0.92
POLR2A-209ENST00000617998 GLDNQ6ZMI3 551 aaPredicted RBP9.32□□□□□ -0.92
POLR2A-209ENST00000617998 LCNL1Q6ZST4 164 aa9.32□□□□□ -0.92
POLR2A-209ENST00000617998 VMO1Q7Z5L0 202 aa9.32□□□□□ -0.92
POLR2A-209ENST00000617998 RHOXF1Q8NHV9 184 aa9.32□□□□□ -0.92
POLR2A-209ENST00000617998 DERL3Q96Q80 235 aa9.32□□□□□ -0.92
POLR2A-209ENST00000617998 J3QR06 171 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 OR2J3O76001 311 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 HRH1P35367 487 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 MFFQ9GZY8 342 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 TXNL4BQ9NX01 149 aaKnown RBP9.31□□□□□ -0.92
POLR2A-209ENST00000617998 NDUFB11Q9NX14 153 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 ZNF230Q9UIE0 474 aaPredicted RBP9.31□□□□□ -0.92
POLR2A-209ENST00000617998 OR51B2Q9Y5P1 312 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 FAM209BQ5JX69 171 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 AADACL4Q5VUY2 407 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 HCP5Q6MZN7 132 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 SLC25A21Q9BQT8 299 aaPredicted RBP9.31□□□□□ -0.92
POLR2A-209ENST00000617998 CHST5Q9GZS9 411 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 TMEM56-RWDD3S4R434 201 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 TECTAO75443 2155 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 LY6HO94772 140 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 NR4A2P43354 598 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 CUL9Q8IWT3 2517 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 PFDN5Q99471 154 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 A0A1B0GUS0 222 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 TMEM262E9PQX1 116 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 IFI6P09912 130 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 CTRB1P17538 263 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 PI3P19957 117 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 CTRB2Q6GPI1 263 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 PIKFYVEQ9Y2I7 2098 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 NR2C2APQ86WQ0 139 aa9.31□□□□□ -0.92
POLR2A-209ENST00000617998 ACTR3CQ9C0K3 210 aaPredicted RBP9.31□□□□□ -0.92
POLR2A-209ENST00000617998 LSM2Q9Y333 95 aaKnown RBP9.31□□□□□ -0.92
POLR2A-209ENST00000617998 OR4C46A6NHA9 309 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 SLC17A2O00624 439 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 RGS13O14921 159 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 PIGYQ3MUY2 71 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 ZNF362Q5T0B9 420 aaPredicted RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 LEAP2Q969E1 77 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 TMEM54Q969K7 222 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 PUS1Q9Y606 427 aaKnown RBP eCLIP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 ERP29P30040 261 aaKnown RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 CNN1P51911 297 aaKnown RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 ZP1P60852 638 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 MEF2CQ06413 473 aaPredicted RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 WDFY2Q96P53 400 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 RAG2P55895 527 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 ORAI1Q96D31 301 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 TMPRSS13Q9BYE2 586 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 CEPT1Q9Y6K0 416 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 DBX1A6NMT0 343 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 CORTO00230 105 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 CHEK1O14757 476 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 TPT1P13693 172 aaKnown RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 PRB3Q04118 309 aaPredicted RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 ISG20L2Q9H9L3 353 aaKnown RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 MOB4Q9Y3A3 225 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 COX5AP20674 150 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 NEUROG1Q92886 237 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 VGLL1Q99990 258 aa9.3□□□□□ -0.92
POLR2A-209ENST00000617998 PATZ1Q9HBE1 687 aaKnown RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 MRPL22Q9NWU5 206 aaKnown RBP9.3□□□□□ -0.92
POLR2A-209ENST00000617998 H0Y980 276 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 HIST1H1DP16402 221 aaKnown RBP9.29□□□□□ -0.92
POLR2A-209ENST00000617998 NANOGP1Q8N7R0 232 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 OR51S1Q8NGJ8 323 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 PRDM13Q9H4Q3 707 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 TICRRQ7Z2Z1 1910 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 PTGDSP41222 190 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 RPL8P62917 257 aaKnown RBP9.29□□□□□ -0.92
POLR2A-209ENST00000617998 FAM213BQ8TBF2 198 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 NIPSNAP3BQ9BS92 247 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 COL4A6Q14031 1691 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 A0A0U1RQV5 110 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 MBP02144 154 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 LDLRAD2Q5SZI1 272 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 SIGLECL1Q8N7X8 197 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 NPFFO15130 113 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 SIAH2O43255 324 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 PLAUP00749 431 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 ZNF546Q86UE3 836 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 TMEM219Q86XT9 240 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 FOCADQ5VW36 1801 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 HSBP1L1C9JCN9 74 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 TM4SF5O14894 197 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 PSG7Q13046 419 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 FAM122CQ6P4D5 195 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 LYPD4Q6UWN0 246 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 ZBTB34Q8NCN2 500 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 OR4A4PQ8NGN8 299 aa9.29□□□□□ -0.92
POLR2A-209ENST00000617998 ATPIF1Q9UII2 106 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms