RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 ZNF728P0DKX0 622 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 SLC25A16P16260 332 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 CCL3L1P16619 93 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 PAX2Q02962 417 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 PLET1Q6UQ28 207 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 FAM185AQ8N0U4 392 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 CREB3L1Q96BA8 519 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 MOB3AQ96BX8 217 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 ZNF714Q96N38 554 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 FXYD6Q9H0Q3 95 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 C20orf85Q9H1P6 137 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 GAL3ST2Q9H3Q3 398 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 NUBP2Q9Y5Y2 271 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 FLNAP21333 2647 aaKnown RBP12.48□□□□□ -0.41
CBWD1-225ENST00000616944 PPYP01298 95 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 AADACP22760 399 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 OMGP23515 440 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 ZBTB25P24278 435 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 FPR2P25090 351 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 ZFP36P26651 326 aaKnown RBP12.48□□□□□ -0.41
CBWD1-225ENST00000616944 GNMTQ14749 295 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 FAM53AQ6NSI3 398 aaPredicted RBP12.48□□□□□ -0.41
CBWD1-225ENST00000616944 PRSS57Q6UWY2 283 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 HEPN1Q6WQI6 88 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 Q6ZNX1 250 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 LDLRAD3Q86YD5 345 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 OR52L2PQ8NGH6 319 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 GINS4Q9BRT9 223 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 PARP12Q9H0J9 701 aaKnown RBP12.48□□□□□ -0.41
CBWD1-225ENST00000616944 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 JPT1Q9UK76 154 aa12.48□□□□□ -0.41
CBWD1-225ENST00000616944 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 MMP23AO75900 390 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 MECP2P51608 486 aaKnown RBP12.47□□□□□ -0.41
CBWD1-225ENST00000616944 SURF2Q15527 256 aaPredicted RBP12.47□□□□□ -0.41
CBWD1-225ENST00000616944 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 Q5PR19 223 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 OR10A7Q8NGE5 316 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 OR52M1Q8NGK5 317 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 MARCH1Q8TCQ1 289 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 DMRTB1Q96MA1 342 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 RDH8Q9NYR8 311 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 FLVCR2Q9UPI3 526 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 POLR3KQ9Y2Y1 108 aaPredicted RBP12.47□□□□□ -0.41
CBWD1-225ENST00000616944 OR2W1Q9Y3N9 320 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 AKAP9Q99996 3911 aa12.47□□□□□ -0.41
CBWD1-225ENST00000616944 MYO9AB2RTY4 2548 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 TRAV6A0A075B6T7 132 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 LOC105371242A0A075B767 164 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 IGHV3-43A0A0B4J1X8 118 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 PPIAL4CA0A0B4J2A2 164 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 IGKV1D-13A0A0B4J2D9 117 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 HSPA12AO43301 675 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 RBP4P02753 201 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 PPIAL4GP0DN37 164 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 IGHV3-43DP0DP04 118 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 IGKV1-13P0DP09 117 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 PPP1CCP36873 323 aaKnown RBP12.46□□□□□ -0.41
CBWD1-225ENST00000616944 CEACAM6P40199 344 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 RAG2P55895 527 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 UTF1Q5T230 341 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 CD276Q5ZPR3 534 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 ZDHHC22Q8N966 263 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 GFOD1Q9NXC2 390 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 IDI2-AS1Q9NZ38 188 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 ZNF69Q9UC07 566 aa12.46□□□□□ -0.41
CBWD1-225ENST00000616944 ZNF469Q96JG9 3925 aaPredicted RBP12.46□□□□□ -0.42
CBWD1-225ENST00000616944 CELSR1Q9NYQ6 3014 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 A0A0B4J293 547 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 FAM157AC9JC47 383 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 YPEL1O60688 119 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 LIPFP07098 398 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 ECI1P42126 302 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 UCP3P55916 312 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 ERVFRD-1P60508 538 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 MORN2Q502X0 79 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 LY6G6FQ5SQ64 297 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 PRAMEF5Q5TYX0 476 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 YPEL2Q96QA6 119 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 C5orf66Q9H5L9 145 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 GPR132Q9UNW8 380 aa12.45□□□□□ -0.42
CBWD1-225ENST00000616944 TEX15Q9BXT5 2789 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 ARPC1BO15143 372 aaKnown RBP12.44□□□□□ -0.42
CBWD1-225ENST00000616944 HERV-K104P61576 105 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 BAMBIQ13145 260 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 ZNF439Q8NDP4 499 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 OR10V1Q8NGI7 309 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 AGMATQ9BSE5 352 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 A0A087X0M5 115 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 A0A1B0GX30 115 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 A0A1W2PPH5 198 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 INMT-MINDY4F8WBC2 141 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 ITGB1BP1O14713 200 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 ENSAO43768 121 aaKnown RBP12.44□□□□□ -0.42
CBWD1-225ENST00000616944 PEX14O75381 377 aa12.44□□□□□ -0.42
CBWD1-225ENST00000616944 FOXH1O75593 365 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms