RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 VDAC1P21796 283 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MSX1P28360 303 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SLC38A11Q08AI6 406 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MS4A18Q3C1V0 323 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR4A47Q6IF82 309 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MRPL43Q8N983 215 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 DEFB126Q9BYW3 111 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 WASHC3Q9Y3C0 194 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZNF106Q9H2Y7 1883 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LRRK1Q38SD2 2015 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TMEM50AO95807 157 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 PSG2P11465 335 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 BPIFB3P59826 476 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MKXQ8IYA7 352 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 UHRF2Q96PU4 802 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 WNT5BQ9H1J7 359 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 WIPI2Q9Y4P8 454 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 FOXS1O43638 330 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 STPG4Q8N801 248 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LIPHQ8WWY8 451 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZFP30Q9Y2G7 519 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CFAP54Q96N23 3096 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 FER1L5A0AVI2 2057 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 HSBP1O75506 76 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 DXOO77932 396 aaKnown RBP12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 NRASP01111 189 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ADMP35318 185 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TM4SF4P48230 202 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ADPRHL1Q8NDY3 354 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ELSPBP1Q96BH3 223 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MSI2Q96DH6 328 aaKnown RBP12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LAMTOR2Q9Y2Q5 125 aa12.1□□□□□ -0.47
TNFRSF11A-205ENST00000616710 USF3Q68DE3 2245 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 DHRS3O75911 302 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZNF818PQ6ZRF7 136 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MTCH1Q9NZJ7 389 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SYNGR2O43760 224 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 KBTBD11O94819 623 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SLC25A6P12236 298 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MSR1P21757 451 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LILRA6Q6PI73 481 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 WDFY1Q8IWB7 410 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 GJC3Q8NFK1 279 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR2V1Q8NHB1 315 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 BADQ92934 168 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 KLHDC7BQ96G42 594 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 DERL1Q9BUN8 251 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TMEM222Q9H0R3 208 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 WDR90Q96KV7 1748 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 POLEQ07864 2286 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LOC102725191A0A1B0GVB3 256 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 FBLL1A6NHQ2 334 aaKnown RBP12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 GLB1P16278 677 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 GALNSP34059 522 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 RABEPKQ7Z6M1 372 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR6C1Q96RD1 312 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CUTCQ9NTM9 273 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 PTPRZ1P23471 2315 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MYO15AQ9UKN7 3530 aa12.08□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZNF814B7Z6K7 855 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TRAPPC2LH3BP13 241 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 UMODP07911 640 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ZNF17P17021 662 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 NTSR1P30989 418 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 UCP2P55851 309 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TRIOBPQ9H2D6 2365 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TRAV38-1A0A0B4J264 116 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 SH2D1BO14796 132 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CCL25O15444 150 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 MYF5P13349 255 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 DEFB133Q30KQ1 61 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 HES3Q5TGS1 186 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 LCN12Q6JVE5 192 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 KLHDC1Q8N7A1 406 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 NANOS1Q8WY41 292 aaKnown RBP12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TECRQ9NZ01 308 aaKnown RBP12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CACNA1EQ15878 2313 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 LNP1A1A4G5 178 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 FUT7Q11130 342 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 PRR27Q6MZM9 219 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CISD2Q8N5K1 135 aaKnown RBP12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 OR5L2Q8NGL0 311 aa12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 MRPL18Q9H0U6 180 aaKnown RBP12.08□□□□□ -0.48
TNFRSF11A-205ENST00000616710 HOXA6P31267 233 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CYP2G1PQ6ZSU1 146 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 MRPL21Q7Z2W9 205 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ANGPTL4Q9BY76 406 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TRAF3IP2O43734 574 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CCL2P13500 99 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RAC2P15153 192 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 VEGFBP49765 207 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 GRB2P62993 217 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 SRYQ05066 204 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 SELENOHQ8IZQ5 122 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms