RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 PSMB8P28062 276 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 LSAMPQ13449 338 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 AWAT2Q6E213 333 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 C4orf3Q8WVX3 66 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 MRPS24Q96EL2 167 aaKnown RBP16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 KCTD7Q96MP8 289 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 RDH12Q96NR8 316 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 OR14A2Q96R54 314 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 BANF2Q9H503 90 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 PEX16Q9Y5Y5 336 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 TRBV5-7A0A0A0MS05 114 aa16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 SEC14L6B5MCN3 397 aa16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 SLC2A2P11168 524 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 MYF6P23409 242 aa16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 ADARB1P78563 741 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 FHL3Q13643 280 aa16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 ZNF485Q8NCK3 441 aa16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 TMEM80Q96HE8 168 aa16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 ZNF107Q9UII5 783 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 SCOCQ9UIL1 159 aa16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 ZNF580Q9UK33 172 aa16.22■□□□□ 0.19
TRAPPC3-208ENST00000616074 HUWE1Q7Z6Z7 4374 aaKnown RBP16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 LANCL1O43813 399 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 SC5DO75845 299 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 MAS1P04201 325 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 NHLRC4P0CG21 123 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 MGMTP16455 207 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 ECI1P42126 302 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 GNMTQ14749 295 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 MMDQ15546 238 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 TRAT1Q6PIZ9 186 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 C5orf24Q7Z6I8 188 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 SELENOIQ9C0D9 397 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 TAF9BQ9HBM6 251 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 OR2S2Q9NQN1 319 aa16.21■□□□□ 0.19
TRAPPC3-208ENST00000616074 PNMA8CA0A1B0GUJ8 204 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 FAM90A10PA6NDY2 464 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 FAM90A7PA6NKC0 464 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 FAM90A23PA8MXZ1 464 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 BAG2O95816 211 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 MORN2Q502X0 79 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 NKAPLQ5M9Q1 402 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 STEAP3Q658P3 488 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 SIGIRRQ6IA17 410 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 LYPD6Q86Y78 171 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 OR11H1Q8NG94 326 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 OR52L2PQ8NGH6 319 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 MYOZ3Q8TDC0 251 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 Q96M66 194 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 CHCHD3Q9NX63 227 aaKnown RBP16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 U3KQK5 164 aa16.2■□□□□ 0.18
TRAPPC3-208ENST00000616074 UBE2QL1A1L167 161 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 CA11O75493 328 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 CRTAPO75718 401 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 OR5H8P0DN80 308 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 MED21Q13503 144 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 ZNF260Q3ZCT1 412 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 ODF3L1Q8IXM7 274 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 GGHQ92820 318 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 RITA1Q96K30 269 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 DERL3Q96Q80 235 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 ABHD14AQ9BUJ0 271 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 GNB4Q9HAV0 340 aa16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 MBNL3Q9NUK0 354 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-208ENST00000616074 G3V318 75 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 FUT3P21217 361 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 CNTFRP26992 372 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 PPIFP30405 207 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 PPP1CCP36873 323 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 CAPGP40121 348 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 ACTBP60709 375 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 KIAA0141Q14154 515 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 CDH26Q8IXH8 852 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 MRPL30Q8TCC3 161 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 CYGBQ8WWM9 190 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 MRPL20Q9BYC9 149 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 KLK15Q9H2R5 256 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 JPT1Q9UK76 154 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 WSB1Q9Y6I7 421 aa16.18■□□□□ 0.18
TRAPPC3-208ENST00000616074 ATP6V0E1O15342 81 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 GLAP06280 429 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 ST3GAL4Q11206 333 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 DOC2BQ14184 412 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 ASPHD1Q5U4P2 390 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 FAM46BQ96A09 425 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 UBE2E2Q96LR5 201 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 ASCL2Q99929 193 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 NABP2Q9BQ15 211 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 CHCHD6Q9BRQ6 235 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 KCNIP1Q9NZI2 227 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 ZNF256Q9Y2P7 627 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 STAB2Q8WWQ8 2551 aa16.17■□□□□ 0.18
TRAPPC3-208ENST00000616074 DNAH7Q8WXX0 4024 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 IGHV7-81A0A0B4J1V7 117 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 I3L521 148 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 PDCD6O75340 191 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 HLA-DRB1P01911 266 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 TAS2R43P59537 309 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 TTC23Q5W5X9 447 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 TMEM65Q6PI78 240 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms