RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PSENENQ9NZ42 101 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
MSH6-214ENST00000616033 ZDBF2Q9HCK1 2354 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 GOSR1O95249 250 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 CDS2O95674 445 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 CFHR1Q03591 330 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 C1orf185Q5T7R7 199 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 SSC4DQ8WTU2 575 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 TMEM18Q96B42 140 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 ZNF845Q96IR2 970 aaPredicted RBP11.29□□□□□ -0.6
MSH6-214ENST00000616033 MRGPRX4Q96LA9 322 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 CD300LBA8K4G0 201 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 FGF5P12034 268 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 GPM6AP51674 278 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.29□□□□□ -0.6
MSH6-214ENST00000616033 TCF23Q7RTU1 214 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 GPR146Q96CH1 333 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 CACNA1EQ15878 2313 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 A0A1W2PPC4 97 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 CLDN1O95832 211 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 BCL3P20749 454 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 CCL1P22362 96 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 EXT1Q16394 746 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 Q6ZRM9 215 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 FKBP11Q9NYL4 201 aa11.29□□□□□ -0.6
MSH6-214ENST00000616033 A0A096LPE4 126 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 A0A1W2PPZ6 126 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 DVL1O14640 695 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 SPINK4O60575 86 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 VDAC1P21796 283 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 CHRNB4P30926 498 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 FASLGP48023 281 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 RAB7AP51149 207 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 MMDQ15546 238 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 VASH2Q86V25 355 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 WDR5BQ86VZ2 330 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
MSH6-214ENST00000616033 RNF150Q9ULK6 438 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 PRR14LQ5THK1 2151 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 ZNF732B4DXR9 585 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 MKRN2OSH3BPM6 223 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 TUSC2O75896 110 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 CD38P28907 300 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
MSH6-214ENST00000616033 ANKRD37Q7Z713 158 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 ZNF441Q8N8Z8 693 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 OR6C1Q96RD1 312 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 OR51I2Q9H344 312 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 SMDT1Q9H4I9 107 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 V9GYS6 101 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 SLC22A20A6NK97 555 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 C1QTNF9BB2RNN3 333 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 HPRT1P00492 218 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 PDGFBP01127 241 aaPredicted RBP11.28□□□□□ -0.6
MSH6-214ENST00000616033 DTYMKP23919 212 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 MDH2P40926 338 aaKnown RBP11.28□□□□□ -0.6
MSH6-214ENST00000616033 EIF3IQ13347 325 aaKnown RBP11.28□□□□□ -0.6
MSH6-214ENST00000616033 YRDCQ86U90 279 aaKnown RBP11.28□□□□□ -0.6
MSH6-214ENST00000616033 ZNF709Q8N972 641 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 OR51G1Q8NGK1 321 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 OR5R1Q8NH85 324 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 MS4A10Q96PG2 267 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 ANGPTL4Q9BY76 406 aa11.28□□□□□ -0.6
MSH6-214ENST00000616033 KIAA1324LA8MWY0 1029 aaPredicted RBP11.27□□□□□ -0.6
MSH6-214ENST00000616033 RPL36A-HNRNPH2H7BZ11 118 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 PAX9P55771 341 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 ERVFC1-1P60608 527 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 SLC23A3Q6PIS1 610 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 TMEM108Q6UXF1 575 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 ADPRHL1Q8NDY3 354 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 OIT3Q8WWZ8 545 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 SIGLEC12Q96PQ1 595 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 OR4C12Q96R67 309 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 TAAR3PQ9P1P4 343 aa11.27□□□□□ -0.6
MSH6-214ENST00000616033 MRPS18CQ9Y3D5 142 aaKnown RBP11.27□□□□□ -0.6
MSH6-214ENST00000616033 NUPR1O60356 82 aa11.27□□□□□ -0.61
MSH6-214ENST00000616033 TDHQ8IZJ6 230 aa11.27□□□□□ -0.61
MSH6-214ENST00000616033 MRPL30Q8TCC3 161 aaKnown RBP11.27□□□□□ -0.61
MSH6-214ENST00000616033 PARLQ9H300 379 aa11.27□□□□□ -0.61
MSH6-214ENST00000616033 VAX2Q9UIW0 290 aa11.27□□□□□ -0.61
MSH6-214ENST00000616033 MTCH2Q9Y6C9 303 aa11.27□□□□□ -0.61
MSH6-214ENST00000616033 PAGE4O60829 102 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 H1FOOQ8IZA3 346 aaPredicted RBP11.26□□□□□ -0.61
MSH6-214ENST00000616033 SMRP1Q8NCR6 262 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 TWSG1Q9GZX9 223 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 SRD5A3Q9H8P0 318 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 GPR27Q9NS67 375 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 DMDP11532 3685 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 IGHV1OR21-1A0A087WYE8 117 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 A0A0U1RQV5 110 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 A0A1B0GW64 132 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 AQP7P3A6NL99 342 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 B4DEV8 164 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 DRD1P21728 446 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms