RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 TREM2Q9NZC2 230 aa8.95□□□□□ -0.98
COL4A1-205ENST00000615732 DNAJB11Q9UBS4 358 aa8.95□□□□□ -0.98
COL4A1-205ENST00000615732 TRAPPC2LQ9UL33 140 aa8.95□□□□□ -0.98
COL4A1-205ENST00000615732 TEX13DA0A0J9YY54 714 aaPredicted RBP8.94□□□□□ -0.98
COL4A1-205ENST00000615732 TMEM30CPA0ZSE6 113 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 POM121CA8CG34 1229 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 FAM25EA8MYX2 175 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 B4DSR2 109 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 C3orf80F5H4A9 247 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 BET1O15155 118 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 PPIHO43447 177 aaKnown RBP8.94□□□□□ -0.98
COL4A1-205ENST00000615732 DUS4LO95620 317 aaKnown RBP8.94□□□□□ -0.98
COL4A1-205ENST00000615732 AADACP22760 399 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 RBMXP38159 391 aaKnown RBP8.94□□□□□ -0.98
COL4A1-205ENST00000615732 SEC61A1P61619 476 aaKnown RBP8.94□□□□□ -0.98
COL4A1-205ENST00000615732 ATXN7L3Q14CW9 347 aaPredicted RBP8.94□□□□□ -0.98
COL4A1-205ENST00000615732 MOGAT3Q86VF5 341 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 SGPP2Q8IWX5 399 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 SLC38A6Q8IZM9 456 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 ZNF565Q8N9K5 539 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 OR5M8Q8NGP6 311 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 OR11L1Q8NGX0 322 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 MITD1Q8WV92 249 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 TMEM230Q96A57 120 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 MOB3AQ96BX8 217 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 RTBDNQ9BSG5 229 aaPredicted RBP8.94□□□□□ -0.98
COL4A1-205ENST00000615732 TMPRSS13Q9BYE2 586 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 TMEM165Q9HC07 324 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 SLC23A1Q9UHI7 598 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 ZDHHC8Q9ULC8 765 aa8.94□□□□□ -0.98
COL4A1-205ENST00000615732 A0A0B4J2A0 478 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 RFPL4AA6NLU0 287 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 RFPL4AL1F8VTS6 287 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 KCNAB3O43448 404 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 RGS11O94810 467 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 OR2A4O95047 310 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 IGHV1-46P01743 117 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 MSMBP08118 114 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 SCTP09683 121 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 IRF2P14316 349 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 NFYAP23511 347 aaPredicted RBP8.93□□□□□ -0.98
COL4A1-205ENST00000615732 KCNJ3P48549 501 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 CEBPDP49716 269 aaPredicted RBP8.93□□□□□ -0.98
COL4A1-205ENST00000615732 DHODHQ02127 395 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 C2orf68Q2NKX9 166 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 IGSF11Q5DX21 431 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 AVPI1Q5T686 147 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 ZNF660Q6AZW8 331 aaPredicted RBP8.93□□□□□ -0.98
COL4A1-205ENST00000615732 ZNF880Q6PDB4 577 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 DHRS11Q6UWP2 260 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 FAM90A1Q86YD7 464 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 OR4A4PQ8NGN8 299 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 GRPEL2Q8TAA5 225 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 PPP1R35Q8TAP8 253 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 PLPPR1Q8TBJ4 325 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 TMEM186Q96B77 213 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 OR2A7Q96R45 310 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 DIRC2Q96SL1 478 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 KCNIP1Q9NZI2 227 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 COMMD9Q9P000 198 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 PIPOXQ9P0Z9 390 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 SHPKQ9UHJ6 478 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 PAIP2BQ9ULR5 123 aaKnown RBP8.93□□□□□ -0.98
COL4A1-205ENST00000615732 WIPI2Q9Y4P8 454 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 HSPB11Q9Y547 144 aa8.93□□□□□ -0.98
COL4A1-205ENST00000615732 DYSFO75923 2080 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 C5orf51A6NDU8 294 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 SRRM5B3KS81 715 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 IFNL4K9M1U5 179 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 CCSO14618 274 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 RP2O75695 350 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 ZNF205O95201 554 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 PTBP3O95758 552 aaKnown RBP8.92□□□□□ -0.98
COL4A1-205ENST00000615732 PPYP01298 95 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 EGR1P18146 543 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 C4BPBP20851 252 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 S100GP29377 79 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 GABRA2P47869 451 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 UCP3P55916 312 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 PIGPP57054 158 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 CCL8P80075 99 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 COL10A1Q03692 680 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 FGL1Q08830 312 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 PHLDA2Q53GA4 152 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 DCAF12L2Q5VW00 463 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 GSG1LQ6UXU4 331 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 ZNF497Q6ZNH5 498 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 Q6ZPA2 131 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 ASCC1Q8N9N2 400 aaKnown RBP8.92□□□□□ -0.98
COL4A1-205ENST00000615732 OR10J5Q8NHC4 309 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 ERGIC1Q969X5 290 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 TMEM246Q9BRR3 403 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 DNTTIP1Q9H147 329 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 MS4A5Q9H3V2 200 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 IL19Q9UHD0 177 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 OPN4Q9UHM6 478 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 KCNIP3Q9Y2W7 256 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
COL4A1-205ENST00000615732 MGAM2Q2M2H8 2515 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms