RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 DEPPQ9NTK1 212 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 BSNQ9UPA5 3926 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 C3orf85A0A1B0GTC6 90 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 P04436 131 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 IGFL2Q6UWQ7 119 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 RNF138Q8WVD3 245 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 ZNF845Q96IR2 970 aaPredicted RBP18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 ELL3Q9HB65 397 aaPredicted RBP18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 ZNF286AQ9HBT8 521 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 Q9N2K0 584 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 LIPT2A6NK58 231 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 MPPED1O15442 326 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 RPLP1P05386 114 aaKnown RBP18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 HERV-K104P61576 105 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 ZNF880Q6PDB4 577 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 BTNL3Q6UXE8 466 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 P4HA3Q7Z4N8 544 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 ZNF573Q86YE8 665 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 MDS2Q8NDY4 140 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 RELTQ969Z4 430 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 GAB2Q9UQC2 676 aa18.78■□□□□ 0.6
POLR2J3-220ENST00000613744 OMGP23515 440 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 TNFSF10P50591 281 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 ID3Q02535 119 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 ZNF787Q6DD87 383 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 CYP2G1PQ6ZSU1 146 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 MRGPRGQ86SM5 289 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 ODF3L1Q8IXM7 274 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 OR5B12Q96R08 314 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 TP53RKQ96S44 253 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 TMEM208Q9BTX3 173 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 PLSCR2Q9NRY7 297 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 ITPR1Q14643 2758 aa18.77■□□□□ 0.6
POLR2J3-220ENST00000613744 SSSCA1O60232 199 aa18.77■□□□□ 0.59
POLR2J3-220ENST00000613744 NR2C1P13056 603 aa18.77■□□□□ 0.59
POLR2J3-220ENST00000613744 ZNF66Q6ZN08 573 aa18.77■□□□□ 0.59
POLR2J3-220ENST00000613744 TMEM123Q8N131 208 aa18.77■□□□□ 0.59
POLR2J3-220ENST00000613744 ZADH2Q8N4Q0 377 aa18.77■□□□□ 0.59
POLR2J3-220ENST00000613744 LYZL4Q96KX0 146 aa18.77■□□□□ 0.59
POLR2J3-220ENST00000613744 FAAP24Q9BTP7 215 aa18.77■□□□□ 0.59
POLR2J3-220ENST00000613744 EMC6Q9BV81 110 aa18.77■□□□□ 0.59
POLR2J3-220ENST00000613744 PKD1L2Q7Z442 2459 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 PCNX3Q9H6A9 2034 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 PINLYPA6NC86 204 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 IFNA5P01569 189 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 TYMSP04818 313 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 SP1P08047 785 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 HERPUD1Q15011 391 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 ACTL10Q5JWF8 245 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 NCR3LG1Q68D85 454 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 UEVLDQ8IX04 471 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 GPR173Q9NS66 373 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 B3GAT1Q9P2W7 334 aa18.76■□□□□ 0.59
POLR2J3-220ENST00000613744 OR4A8P0C604 315 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 NPBWR2P48146 333 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 RUNX1Q01196 453 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 ZNF766Q5HY98 468 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 WDR25Q64LD2 544 aaPredicted RBP18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 MEX3BQ6ZN04 569 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 ZNF695Q8IW36 515 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 MRPL41Q8IXM3 137 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 OR51G1Q8NGK1 321 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 SPSB1Q96BD6 273 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 PSMG3Q9BT73 122 aaPredicted RBP18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 LAMP3Q9UQV4 416 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 SHISA8B8ZZ34 492 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 RER1O15258 196 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 CST2P09228 141 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 UCP1P25874 307 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 NPRL2Q8WTW4 380 aa18.75■□□□□ 0.59
POLR2J3-220ENST00000613744 PIGBOS1A0A0B4J2F0 54 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 FAM221AA4D161 298 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 CD46P15529 392 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 OR10J1P30954 320 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 ZNF41P51814 821 aaPredicted RBP18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 TEX38Q6PEX7 206 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 C16orf82Q7Z2V1 217 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 SELENOHQ8IZQ5 122 aaKnown RBP18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 CISD2Q8N5K1 135 aaKnown RBP18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 OR2M3Q8NG83 312 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 OR11L1Q8NGX0 322 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 OR10J5Q8NHC4 309 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 CBLN4Q9NTU7 201 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 FKBP11Q9NYL4 201 aa18.74■□□□□ 0.59
POLR2J3-220ENST00000613744 ZFP92A6NM28 416 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 OPRM1P35372 400 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 CYB5R2Q6BCY4 276 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 GBGT1Q8N5D6 347 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 RBMXL3Q8N7X1 1067 aaKnown RBP18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 BTF3L4Q96K17 158 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 IMMP2LQ96T52 175 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 UBE2J1Q9Y385 318 aaPredicted RBP18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 ATXN7O15265 892 aaPredicted RBP18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 CST7O76096 145 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 GALR1P47211 349 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 P2RY6Q15077 328 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 TMEM241Q24JQ0 296 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 ASCL4Q6XD76 172 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms