RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 TBX21Q9UL17 535 aa7.4□□□□□ -1.22
ALMS1-206ENST00000613296 TNFSF10P50591 281 aa7.4□□□□□ -1.22
ALMS1-206ENST00000613296 RTL10Q7L3V2 364 aa7.4□□□□□ -1.22
ALMS1-206ENST00000613296 TCF24Q7RTU0 167 aa7.4□□□□□ -1.22
ALMS1-206ENST00000613296 TMEM250H0YL14 139 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 MALP21145 153 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 SSBP4Q9BWG4 385 aaPredicted RBP7.4□□□□□ -1.23
ALMS1-206ENST00000613296 LINC01553A4QN01 128 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 LMO3Q8TAP4 145 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 MS4A3Q96HJ5 214 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 LINC01387J3KSC0 135 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 LDLRAD4O15165 306 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 DSCR4P56555 118 aaPredicted RBP7.4□□□□□ -1.23
ALMS1-206ENST00000613296 SRSF5Q13243 272 aaKnown RBP7.4□□□□□ -1.23
ALMS1-206ENST00000613296 MS4A6AQ9H2W1 248 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 IL19Q9UHD0 177 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 ZNF646O15015 1829 aaPredicted RBP7.4□□□□□ -1.23
ALMS1-206ENST00000613296 PITX3O75364 302 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 CD27P26842 260 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 PPICP45877 212 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 PAX2Q02962 417 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 SNED1Q8TER0 1413 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 DNASE2BQ8WZ79 361 aa7.4□□□□□ -1.23
ALMS1-206ENST00000613296 KLF16Q9BXK1 252 aaPredicted RBP7.4□□□□□ -1.23
ALMS1-206ENST00000613296 ROS1P08922 2347 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 LPAR2Q9HBW0 351 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 NTMQ9P121 344 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 B9D1Q9UPM9 204 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 MPLP40238 635 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 STARD6P59095 220 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TCF23Q7RTU1 214 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 PDXPQ96GD0 296 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TREM2Q9NZC2 230 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 PTGESO14684 152 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TCTN3Q6NUS6 607 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 ASCL5Q7RTU5 278 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 RNASEH2CQ8TDP1 164 aaKnown RBP7.39□□□□□ -1.23
ALMS1-206ENST00000613296 SLC37A2Q8TED4 501 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 MS4A7Q9GZW8 240 aaPredicted RBP7.39□□□□□ -1.23
ALMS1-206ENST00000613296 C6orf106Q9H6K1 298 aaPredicted RBP7.39□□□□□ -1.23
ALMS1-206ENST00000613296 GFYI3L273 518 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TSPOP30536 169 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 CCDC144NLQ6NUI1 221 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 ZC3H3Q8IXZ2 948 aaKnown RBP7.39□□□□□ -1.23
ALMS1-206ENST00000613296 APOMO95445 188 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 SELENOPP49908 381 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 NIT1Q86X76 327 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 KIR3DL3Q8N743 410 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TRAV8-4A0A0B4J246 113 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TNFSF15O95150 251 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TEX37Q96LM6 180 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TSPAN32Q96QS1 320 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 MTFP1Q9UDX5 166 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 GPX1P07203 203 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 PFN3P60673 137 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 TMEM160Q9NX00 188 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 NBASA2RRP1 2371 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 FFAR1O14842 300 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 PABPC1L2AQ5JQF8 200 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 MGST2Q99735 147 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 AKAP11Q9UKA4 1901 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 HOXA5P20719 270 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 FZD5Q13467 585 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 DMRTA1Q5VZB9 504 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 LHX8Q68G74 356 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 FOXB1Q99853 325 aa7.39□□□□□ -1.23
ALMS1-206ENST00000613296 A0A087WUJ7 227 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 RPS20P60866 119 aaKnown RBP7.38□□□□□ -1.23
ALMS1-206ENST00000613296 FAM216AQ8WUB2 273 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 CXXC4Q9H2H0 198 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 CHST1O43916 411 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 IGF2P01344 180 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 ZNF600Q6ZNG1 722 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 SLC25A10Q9UBX3 287 aaPredicted RBP7.38□□□□□ -1.23
ALMS1-206ENST00000613296 ACACAQ13085 2346 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 A0A1W2PS18 150 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 MEF2BQ02080 365 aaPredicted RBP7.38□□□□□ -1.23
ALMS1-206ENST00000613296 SCD5Q86SK9 330 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 TMEM45BQ96B21 275 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 A0A1W2PR48 441 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 RRHO14718 337 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 DHHO43323 396 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 SRIP30626 198 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 COL9A3Q14050 684 aaPredicted RBP7.38□□□□□ -1.23
ALMS1-206ENST00000613296 OR13H1Q8NG92 308 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 PRR32B1ATL7 298 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 MC5RP33032 325 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 SURF2Q15527 256 aaPredicted RBP7.38□□□□□ -1.23
ALMS1-206ENST00000613296 GAPTQ8N292 157 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 DEFB123Q8N688 67 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 RCC2Q9P258 522 aaKnown RBP7.38□□□□□ -1.23
ALMS1-206ENST00000613296 SHANK1Q9Y566 2161 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 COL3A1P02461 1466 aaPredicted RBP7.38□□□□□ -1.23
ALMS1-206ENST00000613296 ALG1L2C9J202 215 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 SEC11BP0C7V7 166 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 CX3CL1P78423 397 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 STPG2Q8N412 459 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 MRGPRFQ96AM1 343 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 TRGC1P0CF51 173 aa7.38□□□□□ -1.23
ALMS1-206ENST00000613296 ACVR1Q04771 509 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms