RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 VAMP1P23763 118 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 PPP1CCP36873 323 aaKnown RBP12.22□□□□□ -0.45
CIT-219ENST00000612548 UCP3P55916 312 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 RPL31P62899 125 aaKnown RBP12.22□□□□□ -0.45
CIT-219ENST00000612548 FCN2Q15485 313 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 NDUFA5Q16718 116 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 C17orf58Q2M2W7 97 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 TMEM155Q4W5P6 130 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 PHLDA2Q53GA4 152 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 LYG2Q86SG7 212 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 SLC38A6Q8IZM9 456 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 ZNF525Q8N782 197 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 ZNF431Q8TF32 576 aaPredicted RBP12.22□□□□□ -0.45
CIT-219ENST00000612548 NRGNQ92686 78 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 NINJ1Q92982 152 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 ZNF486Q96H40 463 aaPredicted RBP12.22□□□□□ -0.45
CIT-219ENST00000612548 SLC5A7Q9GZV3 580 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 SPG11Q96JI7 2443 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 DOCK11Q5JSL3 2073 aa12.22□□□□□ -0.45
CIT-219ENST00000612548 FBN2P35556 2912 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 CENPEQ02224 2701 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 PIGPP57054 158 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 ZNF273Q14593 569 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 ABCA11PQ4W5N1 156 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 TMEM128Q5BJH2 165 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 FAHD2BQ6P2I3 314 aaPredicted RBP12.21□□□□□ -0.45
CIT-219ENST00000612548 LDLRAD3Q86YD5 345 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 FAM185AQ8N0U4 392 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 OR8B3Q8NGG8 313 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 FAHD2AQ96GK7 314 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 OR8B2Q96RD0 313 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 RSRP1Q9BUV0 290 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 CELSR2Q9HCU4 2923 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 MIOXQ9UGB7 285 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 LINC00312Q9Y6C7 94 aa12.21□□□□□ -0.45
CIT-219ENST00000612548 YLPM1P49750 1951 aaKnown RBP12.21□□□□□ -0.45
CIT-219ENST00000612548 KBTBD11-OT1A0A1B0GTJ5 212 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 C9orf170A2RU37 121 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 ZNF729A6NN14 1252 aaPredicted RBP12.2□□□□□ -0.46
CIT-219ENST00000612548 HSD17B6O14756 317 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 CGB3P0DN86 165 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 CGB7P0DN87 165 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 GNRHRP30968 328 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 HTD2P86397 168 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
CIT-219ENST00000612548 CD276Q5ZPR3 534 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 NLRC3Q7RTR2 1065 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 SPICQ8N5J4 248 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 CASTOR1Q8WTX7 329 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 CORO2AQ92828 525 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 NEIL1Q96FI4 390 aaPredicted RBP12.2□□□□□ -0.46
CIT-219ENST00000612548 CCL28Q9NRJ3 127 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 SLC2A9Q9NRM0 540 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 CLN8Q9UBY8 286 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 RBM7Q9Y580 266 aaKnown RBP12.2□□□□□ -0.46
CIT-219ENST00000612548 F2RL2O00254 374 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 RGS13O14921 159 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 LUMP51884 338 aaPredicted RBP12.2□□□□□ -0.46
CIT-219ENST00000612548 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
CIT-219ENST00000612548 DHODHQ02127 395 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 ZNF841Q6ZN19 808 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 ZNF818PQ6ZRF7 136 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 OR11H7Q8NGC8 314 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 RAB9BQ9NP90 201 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 GNG12Q9UBI6 72 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 JPT1Q9UK76 154 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 KCNS2Q9ULS6 477 aa12.2□□□□□ -0.46
CIT-219ENST00000612548 UBE2J1Q9Y385 318 aaPredicted RBP12.2□□□□□ -0.46
CIT-219ENST00000612548 ARID1AO14497 2285 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 WNT2P09544 360 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 OR8U9P0C7N5 309 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 CCL3L1P16619 93 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 CD83Q01151 205 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 SLC9A3R2Q15599 337 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 PRAMEF5Q5TYX0 476 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 TMEM200BQ69YZ2 307 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 LPCAT3Q6P1A2 487 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 OR8U1Q8NH10 309 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 LPAR3Q9UBY5 353 aa12.19□□□□□ -0.46
CIT-219ENST00000612548 ASH1LQ9NR48 2969 aaKnown RBP12.18□□□□□ -0.46
CIT-219ENST00000612548 TEX13DA0A0J9YY54 714 aaPredicted RBP12.18□□□□□ -0.46
CIT-219ENST00000612548 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 GPR31O00270 319 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 SFT2D2O95562 160 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 CD34P28906 385 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 ATP5J2P56134 94 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 LOXL3P58215 753 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 WDR25Q64LD2 544 aaPredicted RBP12.18□□□□□ -0.46
CIT-219ENST00000612548 ZNF787Q6DD87 383 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 LIN54Q6MZP7 749 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 SGPP2Q8IWX5 399 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 C12orf45Q8N5I9 185 aaPredicted RBP12.18□□□□□ -0.46
CIT-219ENST00000612548 RTN4IP1Q8WWV3 396 aaPredicted RBP12.18□□□□□ -0.46
CIT-219ENST00000612548 ZNF714Q96N38 554 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 TOLLIPQ9H0E2 274 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 GAL3ST2Q9H3Q3 398 aa12.18□□□□□ -0.46
CIT-219ENST00000612548 PATZ1Q9HBE1 687 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms