RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ADIRFQ15847 76 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 ALKBH6Q3KRA9 238 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 ABLIM2Q6H8Q1 611 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 FAM58AQ8N1B3 248 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 ZNF610Q8N9Z0 462 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 ZNF383Q8NA42 475 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 CLDND2Q8NHS1 167 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 MRPL30Q8TCC3 161 aaKnown RBP11.96□□□□□ -0.49
COL6A1-207ENST00000612273 GNPNAT1Q96EK6 184 aaPredicted RBP11.96□□□□□ -0.49
COL6A1-207ENST00000612273 SNX22Q96L94 193 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 CDIPTO14735 213 aa11.96□□□□□ -0.5
COL6A1-207ENST00000612273 S100GP29377 79 aa11.96□□□□□ -0.5
COL6A1-207ENST00000612273 UCP2P55851 309 aa11.96□□□□□ -0.5
COL6A1-207ENST00000612273 EIF3IQ13347 325 aaKnown RBP11.96□□□□□ -0.5
COL6A1-207ENST00000612273 GCNT2Q8N0V5 402 aa11.96□□□□□ -0.5
COL6A1-207ENST00000612273 CCDC54Q8NEL0 328 aa11.96□□□□□ -0.5
COL6A1-207ENST00000612273 DLL3Q9NYJ7 618 aa11.96□□□□□ -0.5
COL6A1-207ENST00000612273 OR2W1Q9Y3N9 320 aa11.96□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BKO60814 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BJP06899 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BOP23527 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BBP33778 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BDP58876 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 TAS2R30P59541 319 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BCP62807 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 NKX6-1P78426 367 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-207ENST00000612273 FOXO1Q12778 655 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST2H2BEQ16778 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BHQ93079 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BNQ99877 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HIST1H2BMQ99879 126 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 TUBA4BQ9H853 241 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 IL36GQ9NZH8 169 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 CELA3BP08861 270 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 IDH3GP51553 393 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-207ENST00000612273 HLA-DRB3P79483 266 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 RIPPLY2Q5TAB7 128 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 RFESDQ8TAC1 157 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 APOBEC3DQ96AK3 386 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-207ENST00000612273 OR51M1Q9H341 326 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 SLC25A22Q9H936 323 aa11.95□□□□□ -0.5
COL6A1-207ENST00000612273 SEBOXQ9HB31 216 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-207ENST00000612273 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
COL6A1-207ENST00000612273 IGKV1-39P01597 117 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 IGKV1D-39P04432 117 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 SOD3P08294 240 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 PGA5P0DJD9 388 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 GFRA1P56159 465 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 S100A12P80511 92 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 BTNL3Q6UXE8 466 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 FAM185AQ8N0U4 392 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 PRDM14Q9GZV8 571 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 C11orf1Q9H5F2 150 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 UNKLQ9H9P5 680 aaKnown RBP11.94□□□□□ -0.5
COL6A1-207ENST00000612273 BOKQ9UMX3 212 aaPredicted RBP11.94□□□□□ -0.5
COL6A1-207ENST00000612273 RNF115Q9Y4L5 304 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 DEFB108AA8MXU0 73 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 SYNGR2O43760 224 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 MT-CO3P00414 261 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 APLNRP35414 380 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 CEACAM6P40199 344 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 ZFP36L1Q07352 338 aaKnown RBP11.94□□□□□ -0.5
COL6A1-207ENST00000612273 CLN3Q13286 438 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 ATP1A1-AS1Q5TC04 95 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 OR2M7Q8NG81 312 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 FRZBQ92765 325 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 UFSP2Q9NUQ7 469 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 POLEQ07864 2286 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 IGHV3-43A0A0B4J1X8 118 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 PPIHO43447 177 aaKnown RBP11.94□□□□□ -0.5
COL6A1-207ENST00000612273 IGHV3-43DP0DP04 118 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 WNT5AP41221 380 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 RTP5Q14D33 572 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 C6orf15Q6UXA7 325 aaPredicted RBP11.94□□□□□ -0.5
COL6A1-207ENST00000612273 ZNF826PQ6ZT77 177 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 OR10V1Q8NGI7 309 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 GATAD1Q8WUU5 269 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 FAM210BQ96KR6 192 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 FAM234AQ9H0X4 552 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 ZNF391Q9UJN7 358 aa11.94□□□□□ -0.5
COL6A1-207ENST00000612273 PPP1R2P9O14990 202 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 TRGC1P0CF51 173 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 OR1C1Q15619 314 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 ZNF726P1Q15940 193 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 ZNF295-AS1Q8N0V1 137 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 TCEAL7Q9BRU2 100 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 RBKSQ9H477 322 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 GAB2Q9UQC2 676 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 BDP1A6H8Y1 2624 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 LAMTOR5O43504 91 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 NXPH2O95156 264 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 EGR1P18146 543 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 PAX6P26367 422 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 TMPRSS7Q7RTY8 843 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 LHX4Q969G2 390 aa11.93□□□□□ -0.5
COL6A1-207ENST00000612273 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms