RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	NUBP1	P53384	320 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	IQCJ	Q1A5X6	159 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	CEACAM16	Q2WEN9	425 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	MRPL14	Q6P1L8	145 aa	Known RBP	11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130		Q6ZRM9	215 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	COLCA1	Q6ZS62	124 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	OR51H1	Q8NH63	302 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	MRPL30	Q8TCC3	161 aa	Known RBP	11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	TAF15	Q92804	592 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	CLDN23	Q96B33	292 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	REPIN1	Q9BWE0	567 aa	Known RBP	11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	STRADB	Q9C0K7	418 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	OR51I2	Q9H344	312 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	SH2D2A	Q9NP31	389 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	SLC39A9	Q9NUM3	307 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	NPIPB11	E5RHQ5	1161 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	DEGS1	O15121	323 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	CYTIP	O60759	359 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	CBR3	O75828	277 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	NTF4	P34130	210 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	APLNR	P35414	380 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	LTBR	P36941	435 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	SRP14	P37108	136 aa	Known RBP	11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	PSMB3	P49720	205 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	IDH3G	P51553	393 aa	Predicted RBP	11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	ERVS71-1	P61550	626 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	PRDX4	Q13162	271 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	MKX	Q8IYA7	352 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	CISD2	Q8N5K1	135 aa	Known RBP	11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	NECAP1	Q8NC96	275 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR56B2P	Q8NGI1	322 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR10J5	Q8NHC4	309 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	FGFBP3	Q8TAT2	258 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	MANBAL	Q9NQG1	85 aa		11.71	□□□□□ -0.54
UBE2F-223	ENST00000612130	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	MED12	Q93074	2177 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	LRRC3C	A6NJW4	275 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130		B4E171	279 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	TRAPPC2L	H3BP13	241 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	EREG	O14944	169 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	IGKV1-39	P01597	117 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	IGKV1D-39	P04432	117 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	MMP7	P09237	267 aa	Predicted RBP	11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	HOXA6	P31267	233 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	TSPAN7	P41732	249 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	SSR4	P51571	173 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	ELL	P55199	621 aa	Predicted RBP	11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	KCNE4	Q8WWG9	221 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR4C12	Q96R67	309 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	WDR54	Q9H977	334 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	WASF3	Q9UPY6	502 aa		11.7	□□□□□ -0.54
UBE2F-223	ENST00000612130	FAM90A26	D6RGX4	464 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	BTF3	P20290	206 aa	Known RBP	11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	CEACAM21	Q3KPI0	293 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	NRN1L	Q496H8	165 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	ZDHHC23	Q8IYP9	409 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	RPUSD4	Q96CM3	377 aa	Known RBP	11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	HS3ST6	Q96QI5	342 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	PCGF1	Q9BSM1	259 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	FGF23	Q9GZV9	251 aa	Predicted RBP	11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	PARL	Q9H300	379 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	GPR35	Q9HC97	309 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	RTTN	Q86VV8	2226 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	CTXND1	A0A1B0GTU2	59 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	HSPB6	O14558	160 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	VENTX	O95231	258 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	IGKV1-5	P01602	117 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	CELA2A	P08217	269 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	GPM6A	P51674	278 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	B3GALT5-AS1	P59052	145 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	PAX5	Q02548	391 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	SLC38A11	Q08AI6	406 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	IZUMO4	Q1ZYL8	232 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	RPP25L	Q8N5L8	163 aa	Known RBP	11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR10V1	Q8NGI7	309 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR2T10	Q8NGZ9	312 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	LIN7C	Q9NUP9	197 aa	Known RBP	11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	MTCH1	Q9NZJ7	389 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR6C3	Q9NZP0	311 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	IL36RN	Q9UBH0	155 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	WNT16	Q9UBV4	365 aa		11.69	□□□□□ -0.54
UBE2F-223	ENST00000612130	IGHV1-45	A0A0A0MS14	117 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	UBE2L5P	A0A1B0GUS4	154 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130		A0A1W2PPQ1	181 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130		G3V3Y1	287 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	MB	P02144	154 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	CARD18	P57730	90 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	LCN2	P80188	198 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	KCNIP4	Q6PIL6	250 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	GGN	Q86UU5	652 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	BTF3L4	Q96K17	158 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	ELOVL1	Q9BW60	279 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	TMEM9B	Q9NQ34	198 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	FUT9	Q9Y231	359 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	SPAG17	Q6Q759	2223 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	IGKV1D-33	P01593	117 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	IGKV1-33	P01594	117 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	EN2	P19622	333 aa	Predicted RBP	11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms