RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 H0Y8G0 127 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 PAGE4O60829 102 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 YIF1AO95070 293 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 KLK2P20151 261 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 HES1Q14469 280 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 SLC35E3Q7Z769 313 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 OR4S2Q8NH73 311 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 SAP25Q8TEE9 199 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 MS4A10Q96PG2 267 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 GLRX2Q9NS18 164 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 GVINP1Q7Z2Y8 2422 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 FNDC1Q4ZHG4 1894 aaPredicted RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 C3orf80F5H4A9 247 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 RRP8O43159 456 aaKnown RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 PTBP3O95758 552 aaKnown RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 HSPB1P04792 205 aaKnown RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 ZNF735P0CB33 412 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 COX6A1P12074 109 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 ASPHD2Q6ICH7 369 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 TMEM54Q969K7 222 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 ANAPC16Q96DE5 110 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 TTTY12Q9BZ98 90 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 OR2J1Q9GZK6 312 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 WNT5BQ9H1J7 359 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 SYNGR1O43759 233 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 ADH4P08319 380 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 KIR2DS2P43631 304 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 UCP3P55916 312 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 RSPO4Q2I0M5 234 aaPredicted RBP10.73□□□□□ -0.69
CDH1-212ENST00000611625 ZNF880Q6PDB4 577 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 RTBDNQ9BSG5 229 aaPredicted RBP10.73□□□□□ -0.69
CDH1-212ENST00000611625 CHRDL1Q9BU40 450 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 TM2D1Q9BX74 207 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 OR6C3Q9NZP0 311 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 NAT8BQ9UHF3 227 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 FOSL1P15407 271 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 TNFRSF1AP19438 455 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 SOX8P57073 446 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 HES3Q5TGS1 186 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 ZNF665Q9H7R5 613 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 FBLN5Q9UBX5 448 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 H0YL77 283 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 CHEK1O14757 476 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 SELENOHQ8IZQ5 122 aaKnown RBP10.73□□□□□ -0.69
CDH1-212ENST00000611625 OR5D13Q8NGL4 314 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 DNASE2O00115 360 aaPredicted RBP10.73□□□□□ -0.69
CDH1-212ENST00000611625 ST8SIA5O15466 376 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 KCNMB1Q16558 191 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 HIST1H2BAQ96A08 127 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 SH2D2AQ9NP31 389 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 CLCF1Q9UBD9 225 aa10.73□□□□□ -0.69
CDH1-212ENST00000611625 MDC1Q14676 2089 aaKnown RBP10.72□□□□□ -0.69
CDH1-212ENST00000611625 HSBP1O75506 76 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 PGLYRP1O75594 196 aaPredicted RBP10.72□□□□□ -0.69
CDH1-212ENST00000611625 NPBWR2P48146 333 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 GNG4P50150 75 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 KLF3P57682 345 aaPredicted RBP10.72□□□□□ -0.69
CDH1-212ENST00000611625 SUMO1P63165 101 aaKnown RBP10.72□□□□□ -0.69
CDH1-212ENST00000611625 HSD17B10Q99714 261 aaKnown RBP10.72□□□□□ -0.69
CDH1-212ENST00000611625 CLN8Q9UBY8 286 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 CHCHD2Q9Y6H1 151 aaPredicted RBP10.72□□□□□ -0.69
CDH1-212ENST00000611625 CEP250Q9BV73 2442 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 FCN1O00602 326 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 SPINK4O60575 86 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 STUMQ69YW2 141 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 SLC23A3Q6PIS1 610 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 MRPL13Q9BYD1 178 aaKnown RBP10.72□□□□□ -0.69
CDH1-212ENST00000611625 HES4Q9HCC6 221 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 PITPNC1Q9UKF7 332 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 GZMHP20718 246 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 RND3P61587 244 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 RANP62826 216 aaKnown RBP10.72□□□□□ -0.69
CDH1-212ENST00000611625 AESQ08117 197 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 ZNF383Q8NA42 475 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 GPR146Q96CH1 333 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 VAMP8Q9BV40 100 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 PRDM14Q9GZV8 571 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 CT45A10P0DMU9 189 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 PMCHP20382 165 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 TMEM251Q8N6I4 163 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 OR10G8Q8NGN5 311 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 TMEM56Q96MV1 263 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 RARRES2Q99969 163 aa10.72□□□□□ -0.69
CDH1-212ENST00000611625 A0A087X0M5 115 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 A0A1B0GX30 115 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 TMEM210A6NLX4 147 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 SP1P08047 785 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 SUCLG1P53597 346 aaKnown RBP10.71□□□□□ -0.69
CDH1-212ENST00000611625 MRPS11P82912 194 aaKnown RBP10.71□□□□□ -0.69
CDH1-212ENST00000611625 PAQR4Q8N4S7 273 aaPredicted RBP10.71□□□□□ -0.69
CDH1-212ENST00000611625 PARD6AQ9NPB6 346 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 FUT9Q9Y231 359 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 LINC00271P0C7V0 271 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 LGALS4P56470 323 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 STARD6P59095 220 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 SSTP61278 116 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 SSMEM1Q8WWF3 244 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 GALNT14Q96FL9 552 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 ADTRPQ96IZ2 230 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 TP53RKQ96S44 253 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms