RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZNF552Q9H707 407 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 WDR54Q9H977 334 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 PRDM6Q9NQX0 595 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 VAX2Q9UIW0 290 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR2W1Q9Y3N9 320 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 PI4KAP42356 2102 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 MAP1LC3B2A6NCE7 125 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 TRAPPC2LH3BP13 241 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 HMGB3O15347 200 aaKnown RBP12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 IGKV1-5P01602 117 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 TUBG1P23258 451 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 MLF1P58340 268 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 IGFBP7Q16270 282 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 RIPPLY2Q5TAB7 128 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 C16orf82Q7Z2V1 217 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 TMEM183AQ8IXX5 376 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 UBALD1Q8TB05 177 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 CLDN23Q96B33 292 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 ADGRG7Q96K78 797 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 GPR87Q9BY21 358 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 MAP1LC3BQ9GZQ8 125 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 TRAPPC6AO75865 159 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 IGKV1D-33P01593 117 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 IGKV1-33P01594 117 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 CTXN2P0C2S0 81 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 GZMBP10144 247 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 GZMHP20718 246 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 EPHA8P29322 1005 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 SRD5A2P31213 254 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 CD81P60033 236 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 ERVS71-1P61550 626 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 LILRB2Q8N423 598 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR10J5Q8NHC4 309 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 SMIM7Q9BQ49 75 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 ARHGAP21Q5T5U3 1957 aa12.86□□□□□ -0.35
PCDHGB1-202ENST00000611598 C5orf49A4QMS7 147 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZNF503-AS2A6NEH8 195 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 IGLV2-14P01704 120 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 FOXG1P55316 489 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 RTP5Q14D33 572 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 P2RY6Q15077 328 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 LRRC75BQ2VPJ9 315 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 CEACAM21Q3KPI0 293 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 MRGPRGQ86SM5 289 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZDHHC23Q8IYP9 409 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR5R1Q8NH85 324 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR4C12Q96R67 309 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 PPP1R3CQ9UQK1 317 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 TRAV24A0A0B4J272 114 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 SLC31A2O15432 143 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 TGOLN2O43493 480 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZNF737O75373 536 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 NGFP01138 241 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 PFN1P07737 140 aaKnown RBP12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 JOSD1Q15040 202 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 SPANXN5Q5MJ07 72 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 NCR3LG1Q68D85 454 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 PRR18Q8N4B5 295 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 AGBL5Q8NDL9 886 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 RPUSD4Q96CM3 377 aaKnown RBP12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 POM121Q96HA1 1249 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 P2RX4Q99571 388 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 PSMG3Q9BT73 122 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 ELOVL1Q9BW60 279 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 PRRG4Q9BZD6 226 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 LAMP3Q9UQV4 416 aa12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 DIDO1Q9BTC0 2240 aaKnown RBP12.85□□□□□ -0.35
PCDHGB1-202ENST00000611598 UBE2L5PA0A1B0GUS4 154 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 LRRC3CA6NJW4 275 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 LILRA1O75019 489 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 CCL4P13236 92 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 PAX1P15863 534 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 COL19A1Q14993 1142 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 HLA-BQ31612 363 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 TMEM41BQ5BJD5 291 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 MRPL21Q7Z2W9 205 aaKnown RBP12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 MKXQ8IYA7 352 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 PSMF1Q92530 271 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 WDR61Q9GZS3 305 aaKnown RBP12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 CD300LBA8K4G0 201 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 IFNA10P01566 189 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 SNRPCP09234 159 aaKnown RBP12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 FGF5P12034 268 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 SLC25A6P12236 298 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 S100GP29377 79 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 ARF1P84077 181 aaKnown RBP12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 SAXO1Q8IYX7 474 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 RPP25LQ8N5L8 163 aaKnown RBP12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR1P1Q8NH06 330 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 KCNE4Q8WWG9 221 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 CTDSP1Q9GZU7 261 aa12.84□□□□□ -0.35
PCDHGB1-202ENST00000611598 APLNRP35414 380 aa12.83□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZNF664Q8N3J9 261 aa12.83□□□□□ -0.35
PCDHGB1-202ENST00000611598 LHX4Q969G2 390 aa12.83□□□□□ -0.35
PCDHGB1-202ENST00000611598 DEPPQ9NTK1 212 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms