RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 SIRPB1O00241 398 aa18.58■□□□□ 0.56
UBE3C-209ENST00000611269 ATXN7L3Q14CW9 347 aaPredicted RBP18.58■□□□□ 0.56
UBE3C-209ENST00000611269 LIAT1Q6ZQX7 453 aa18.58■□□□□ 0.56
UBE3C-209ENST00000611269 SCARB1Q8WTV0 552 aa18.58■□□□□ 0.56
UBE3C-209ENST00000611269 LRRC29Q8WV35 223 aa18.58■□□□□ 0.56
UBE3C-209ENST00000611269 ERGIC1Q969X5 290 aa18.58■□□□□ 0.56
UBE3C-209ENST00000611269 CABLES2Q9BTV7 478 aa18.58■□□□□ 0.56
UBE3C-209ENST00000611269 GLS2Q9UI32 602 aa18.58■□□□□ 0.56
UBE3C-209ENST00000611269 NBPF19A0A087WUL8 3843 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 KANTRA0A1W2PQU2 76 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 MPPED1O15442 326 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 BCL2L11O43521 198 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 RCC1P18754 421 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-209ENST00000611269 ZNF787Q6DD87 383 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 OR11L1Q8NGX0 322 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 PLPPR1Q8TBJ4 325 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 Q8TCH9 128 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 GLYATL2Q8WU03 294 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 IGFBPL1Q8WX77 278 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 NRGNQ92686 78 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 C18orf12Q96KH6 178 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 CCL19Q99731 98 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 TANC2Q9HCD6 1990 aa18.57■□□□□ 0.56
UBE3C-209ENST00000611269 NPIPB11E5RHQ5 1161 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 HAND1O96004 215 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 PET100P0DJ07 73 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 SP6Q3SY56 376 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 GGNBP1Q5YKI7 109 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 ZNF565Q8N9K5 539 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 MSI2Q96DH6 328 aaKnown RBP18.56■□□□□ 0.56
UBE3C-209ENST00000611269 KIF25Q9UIL4 384 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 WIPI2Q9Y4P8 454 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 OVOL3O00110 214 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 WNT9BO14905 357 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 CFHR2P36980 270 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 UBA52P62987 128 aaKnown RBP18.56■□□□□ 0.56
UBE3C-209ENST00000611269 IAH1Q2TAA2 248 aaPredicted RBP18.56■□□□□ 0.56
UBE3C-209ENST00000611269 LGI3Q8N145 548 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 OR10Z1Q8NGY1 313 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 DCUN1D4Q92564 292 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 DCAF16Q9NXF7 216 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 GSKIPQ9P0R6 139 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 SPG11Q96JI7 2443 aa18.56■□□□□ 0.56
UBE3C-209ENST00000611269 IGHV1-69-2A0A0G2JMI3 117 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 GPR31O00270 319 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 LY6HO94772 140 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 CYB5R3P00387 301 aaPredicted RBP18.55■□□□□ 0.56
UBE3C-209ENST00000611269 EGR1P18146 543 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 KRTAP10-9P60411 292 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 RAB32Q13637 225 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 ACP7Q6ZNF0 438 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 H1FOOQ8IZA3 346 aaPredicted RBP18.55■□□□□ 0.56
UBE3C-209ENST00000611269 GCSAMQ8N6F7 178 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 CCL17Q92583 94 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 SLC5A7Q9GZV3 580 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 MBNL3Q9NUK0 354 aaKnown RBP18.55■□□□□ 0.56
UBE3C-209ENST00000611269 RNF7Q9UBF6 113 aa18.55■□□□□ 0.56
UBE3C-209ENST00000611269 C3orf85A0A1B0GTC6 90 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 LEUTXA8MZ59 168 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 BOLLQ8N9W6 283 aaKnown RBP18.54■□□□□ 0.56
UBE3C-209ENST00000611269 OR10J5Q8NHC4 309 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 SECTM1Q8WVN6 248 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 NEU4Q8WWR8 484 aaPredicted RBP18.54■□□□□ 0.56
UBE3C-209ENST00000611269 DNAJB11Q9UBS4 358 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 SRRM5B3KS81 715 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 LHBP01229 141 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 ESCO2Q56NI9 601 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 ALKAL2Q6UX46 152 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 ST8SIA2Q92186 375 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 TRAPPC2LQ9UL33 140 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 OR2W1Q9Y3N9 320 aa18.54■□□□□ 0.56
UBE3C-209ENST00000611269 IGKV1D-13A0A0B4J2D9 117 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 LYNX1G3V0Z9 82 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 PHF1O43189 567 aaPredicted RBP18.53■□□□□ 0.56
UBE3C-209ENST00000611269 NDUFS7O75251 213 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 IGKV1-13P0DP09 117 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 LYNX1P0DP58 116 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 IRF2P14316 349 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 SRPXP78539 464 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 FAM201AQ5SY85 155 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 C6orf183Q5T699 404 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 ZNF818PQ6ZRF7 136 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 KIRREL1Q96J84 757 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 ARPC5LQ9BPX5 153 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 TMEM106BQ9NUM4 274 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 OR5AC2Q9NZP5 309 aa18.53■□□□□ 0.56
UBE3C-209ENST00000611269 LRRC30A6NM36 301 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.52■□□□□ 0.56
UBE3C-209ENST00000611269 IFNL4K9M1U5 179 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 SPDEFO95238 335 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 COL8A2P25067 703 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 LYZL2Q7Z4W2 148 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 TBC1D26Q86UD7 250 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 RRNAD1Q96FB5 475 aaKnown RBP18.52■□□□□ 0.56
UBE3C-209ENST00000611269 CITED4Q96RK1 184 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 TP53RKQ96S44 253 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 TMEM222Q9H0R3 208 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 OR14J1Q9UGF5 321 aa18.52■□□□□ 0.56
UBE3C-209ENST00000611269 NUP62P37198 522 aaPredicted RBP18.52■□□□□ 0.55
UBE3C-209ENST00000611269 HFEQ30201 348 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms