RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 OR11H1Q8NG94 326 aa10.45□□□□□ -0.74
POLR2J3-219ENST00000608621 C4orf3Q8WVX3 66 aa10.45□□□□□ -0.74
POLR2J3-219ENST00000608621 MRPS24Q96EL2 167 aaKnown RBP10.45□□□□□ -0.74
POLR2J3-219ENST00000608621 BANF2Q9H503 90 aa10.45□□□□□ -0.74
POLR2J3-219ENST00000608621 CKLFQ9UBR5 152 aa10.45□□□□□ -0.74
POLR2J3-219ENST00000608621 DIMT1Q9UNQ2 313 aaKnown RBP10.45□□□□□ -0.74
POLR2J3-219ENST00000608621 EXOSC1Q9Y3B2 195 aaKnown RBP10.45□□□□□ -0.74
POLR2J3-219ENST00000608621 IRGMA1A4Y4 181 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 UBE2QL1A1L167 161 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 LANCL1O43813 399 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 MAS1P04201 325 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 SLC2A2P11168 524 aaPredicted RBP10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 MYL12AP19105 171 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 MYF6P23409 242 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 TMEM30BQ3MIR4 351 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 ZNF260Q3ZCT1 412 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 YIF1BQ5BJH7 314 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 NKAPLQ5M9Q1 402 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 GAPTQ8N292 157 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 OR52L2PQ8NGH6 319 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 TMEM80Q96HE8 168 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 CYYR1Q96J86 154 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 RITA1Q96K30 269 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 ASCL2Q99929 193 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 CHCHD6Q9BRQ6 235 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 SELENOIQ9C0D9 397 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 KLK15Q9H2R5 256 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 TAF9BQ9HBM6 251 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 OR2S2Q9NQN1 319 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 CHCHD3Q9NX63 227 aaKnown RBP10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 SMPD3Q9NY59 655 aaPredicted RBP10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 ZNF107Q9UII5 783 aaPredicted RBP10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 WSB1Q9Y6I7 421 aa10.44□□□□□ -0.74
POLR2J3-219ENST00000608621 TRBV5-7A0A0A0MS05 114 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 CA11O75493 328 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 BAG2O95816 211 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 OR5H8P0DN80 308 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 FSTP19883 344 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 FUT3P21217 361 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 PPIFP30405 207 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 LSAMPQ13449 338 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 FHL3Q13643 280 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 KIAA0141Q14154 515 aaPredicted RBP10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 MMDQ15546 238 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 AWAT2Q6E213 333 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 SIGIRRQ6IA17 410 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 TMEM65Q6PI78 240 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 TRAT1Q6PIZ9 186 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 CDH26Q8IXH8 852 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 ZNF491Q8N8L2 437 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 ZNF485Q8NCK3 441 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 PGLYRP3Q96LB9 341 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 RDH12Q96NR8 316 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 OR14A2Q96R54 314 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 GNB4Q9HAV0 340 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 ZNF580Q9UK33 172 aa10.43□□□□□ -0.74
POLR2J3-219ENST00000608621 PNMA8CA0A1B0GUJ8 204 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 FAM90A10PA6NDY2 464 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 FAM90A7PA6NKC0 464 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 FAM90A23PA8MXZ1 464 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 G3V318 75 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 CRTAPO75718 401 aaPredicted RBP10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 SC5DO75845 299 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 GLAP06280 429 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 MGMTP16455 207 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 CNTFRP26992 372 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 CAPGP40121 348 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 ACTBP60709 375 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 MED21Q13503 144 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 GNMTQ14749 295 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 ODF3L1Q8IXM7 274 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 OR1N2Q8NGR9 330 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 MYOZ3Q8TDC0 251 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 GGHQ92820 318 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 UBE2E2Q96LR5 201 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 OR51J1Q9H342 316 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 MBNL3Q9NUK0 354 aaKnown RBP10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 KCNIP1Q9NZI2 227 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 ZNF256Q9Y2P7 627 aaPredicted RBP10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 RYR3Q15413 4870 aa10.42□□□□□ -0.74
POLR2J3-219ENST00000608621 I3L521 148 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 PPP1CCP36873 323 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 ST3GAL4Q11206 333 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 LYPD6Q86Y78 171 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 MRPL30Q8TCC3 161 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 CYGBQ8WWM9 190 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 Q96M66 194 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 OR5B12Q96R08 314 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 NABP2Q9BQ15 211 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 ZNF251Q9BRH9 671 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 ANKRD60Q9BZ19 345 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 PARP11Q9NR21 331 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 VSIG4Q9Y279 399 aa10.41□□□□□ -0.74
POLR2J3-219ENST00000608621 SORL1Q92673 2214 aa10.4□□□□□ -0.74
POLR2J3-219ENST00000608621 IGHV7-81A0A0B4J1V7 117 aa10.4□□□□□ -0.74
POLR2J3-219ENST00000608621 ATP6V0E1O15342 81 aa10.4□□□□□ -0.74
POLR2J3-219ENST00000608621 YPEL1O60688 119 aa10.4□□□□□ -0.74
POLR2J3-219ENST00000608621 LY86O95711 162 aa10.4□□□□□ -0.74
POLR2J3-219ENST00000608621 IGLV1-40P01703 118 aa10.4□□□□□ -0.74
POLR2J3-219ENST00000608621 HLA-DRB1P01911 266 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms