RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 RAX2Q96IS3 184 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 DERL3Q96Q80 235 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 RASL11BQ9BPW5 248 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 HSPB9Q9BQS6 159 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 GON7Q9BXV9 100 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 SELENOIQ9C0D9 397 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 RAB9BQ9NP90 201 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 OR2S2Q9NQN1 319 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 C8orf4Q9NR00 106 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 CNOT2Q9NZN8 540 aaKnown RBP5.98□□□□□ -1.45
CUX1-219ENST00000606749 GNG12Q9UBI6 72 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 PSORS1C1Q9UIG5 152 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 UBE2QL1A1L167 161 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 EFCAB10A6NFE3 127 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 TXNL1O43396 289 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 LANCL1O43813 399 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 CA11O75493 328 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 CRTAPO75718 401 aaPredicted RBP5.97□□□□□ -1.45
CUX1-219ENST00000606749 ELANEP08246 267 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 GNAO1P09471 354 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 MGMTP16455 207 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 SOX6P35712 828 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 TAS2R43P59537 309 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 CFHR3Q02985 330 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 CXorf66Q5JRM2 361 aaPredicted RBP5.97□□□□□ -1.45
CUX1-219ENST00000606749 C11orf87Q6NUJ2 197 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 TRAT1Q6PIZ9 186 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 C5orf24Q7Z6I8 188 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 NANOGP1Q8N7R0 232 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 OR52L2PQ8NGH6 319 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 FBLIM1Q8WUP2 373 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 CYYR1Q96J86 154 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 RITA1Q96K30 269 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 Q96M66 194 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 UQCC2Q9BRT2 126 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 TAF9BQ9HBM6 251 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 PLCXD1Q9NUJ7 323 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 MBNL3Q9NUK0 354 aaKnown RBP5.97□□□□□ -1.45
CUX1-219ENST00000606749 COL7A1Q02388 2944 aa5.97□□□□□ -1.45
CUX1-219ENST00000606749 RRP9O43818 475 aaKnown RBP5.96□□□□□ -1.46
CUX1-219ENST00000606749 PDCD6O75340 191 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 IGHG4P01861 327 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 IGF1P05019 195 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 GP2P55259 537 aaKnown RBP5.96□□□□□ -1.46
CUX1-219ENST00000606749 WNT4P56705 351 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 RAB25P57735 213 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 DGCR2P98153 550 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 CD69Q07108 199 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 LSAMPQ13449 338 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 KIAA0141Q14154 515 aaPredicted RBP5.96□□□□□ -1.46
CUX1-219ENST00000606749 INSL4Q14641 139 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 GNMTQ14749 295 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 DEFB136Q30KP8 78 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 AHSA2Q719I0 299 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 ZNF554Q86TJ5 538 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 ODF3L1Q8IXM7 274 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 C8orf59Q8N0T1 100 aaPredicted RBP5.96□□□□□ -1.46
CUX1-219ENST00000606749 NKAIN3Q8N8D7 197 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 BPIFB6Q8NFQ5 453 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 OR8U1Q8NH10 309 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 MRPL30Q8TCC3 161 aaKnown RBP5.96□□□□□ -1.46
CUX1-219ENST00000606749 TFAP2CQ92754 450 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 FAM46BQ96A09 425 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 KCTD7Q96MP8 289 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 B9D2Q9BPU9 175 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 CHCHD6Q9BRQ6 235 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 FKBP14Q9NWM8 211 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 KCNIP1Q9NZI2 227 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 GHRLQ9UBU3 117 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 ZMAT5Q9UDW3 170 aaKnown RBP5.96□□□□□ -1.46
CUX1-219ENST00000606749 LRRC42Q9Y546 428 aa5.96□□□□□ -1.46
CUX1-219ENST00000606749 MYL12BO14950 172 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 YPEL1O60688 119 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 RAMP3O60896 148 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 VSIG8P0DPA2 414 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 SLC2A2P11168 524 aaPredicted RBP5.95□□□□□ -1.46
CUX1-219ENST00000606749 VDAC1P21796 283 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 CNTFRP26992 372 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 MAPK3P27361 379 aaPredicted RBP5.95□□□□□ -1.46
CUX1-219ENST00000606749 PSMB8P28062 276 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 PPP1CCP36873 323 aaKnown RBP5.95□□□□□ -1.46
CUX1-219ENST00000606749 HTD2P86397 168 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 RCN1Q15293 331 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 ACSM3Q53FZ2 586 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 LY6G6FQ5SQ64 297 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 C6orf141Q5SZD1 244 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 FAM27D1Q5T7N8 215 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 OGFRL1Q5TC84 451 aaPredicted RBP5.95□□□□□ -1.46
CUX1-219ENST00000606749 LRRTM1Q86UE6 522 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 MS4A15Q8N5U1 240 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 OR5M8Q8NGP6 311 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 C4orf3Q8WVX3 66 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 THRSPQ92748 146 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 GALMQ96C23 342 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 NEDD4LQ96PU5 975 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 YPEL2Q96QA6 119 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 NABP2Q9BQ15 211 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 SULT4A1Q9BR01 284 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 FAAP24Q9BTP7 215 aa5.95□□□□□ -1.46
CUX1-219ENST00000606749 ABHD14AQ9BUJ0 271 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms