RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 RNF39Q9H2S5 420 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 APOBEC3GQ9HC16 384 aaKnown RBP4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 SPANXB1Q9NS25 103 aaPredicted RBP4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 BORCS7-ASMTA0A0B4J1R7 106 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 GEMIN2O14893 280 aaKnown RBP4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 RAMP1O60894 148 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 HLA-DQB1P01920 261 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 GADD45AP24522 165 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 G6PCP35575 357 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 GRB2P62993 217 aaKnown RBP4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 TEX43Q6ZNM6 134 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 FOXI2Q6ZQN5 318 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 SLC37A2Q8TED4 501 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 DDB2Q92466 427 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 C2orf48Q96LS8 159 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 ZNF587Q96SQ5 575 aaPredicted RBP4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 FBXL15Q9H469 300 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 MOB1AQ9H8S9 216 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 CLCF1Q9UBD9 225 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 TPRKBQ9Y3C4 175 aa4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 MRPS16Q9Y3D3 137 aaKnown RBP4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 LSM4Q9Y4Z0 139 aaKnown RBP4.92□□□□□ -1.62
COL4A3BP-207ENST00000604926 IGLC7A0M8Q6 106 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 HMSDA8MTL9 139 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 THBS3P49746 956 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 ZNF385BQ569K4 471 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 HBMQ6B0K9 141 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 MFSD12Q6NUT3 480 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 SLC22A18ASQ8N1D0 253 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 OR51A2Q8NGJ7 313 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 VOPP1Q96AW1 172 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 GMPPAQ96IJ6 420 aaPredicted RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 PRADC1Q9BSG0 188 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 NEURL1BA8MQ27 555 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 SPINT2O43291 252 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 CELA2AP08217 269 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 VSIG10L2P0DP72 767 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 RPL13AP40429 203 aaKnown RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 LHX2P50458 406 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 SGSHP51688 502 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 HSPE1P61604 102 aaKnown RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 CD164Q04900 197 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 SLC38A11Q08AI6 406 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 SLC10A2Q12908 348 aaPredicted RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 HIST3H3Q16695 136 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 C20orf196Q8IYI0 205 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 OVCA2Q8WZ82 227 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 RASL10AQ92737 203 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 GABRG3Q99928 467 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 PBX4Q9BYU1 374 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 WNT10AQ9GZT5 417 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 MARCH5Q9NX47 278 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 TVP23BQ9NYZ1 205 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 NSG2Q9Y328 171 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 SIRT4Q9Y6E7 314 aaPredicted RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 TCRBV7S2A1N4TA0A589 114 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 MEGF11A6BM72 1044 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 K7EQS6 105 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 ZNF708P17019 499 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 AADACP22760 399 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 DIO3P55073 304 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 OSTNP61366 133 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 TNFAIP6P98066 277 aaPredicted RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 TIAL1Q01085 375 aaKnown RBP eCLIP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 ZNF92Q03936 586 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 ENDOGQ14249 297 aaKnown RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 CDC42EP5Q6NZY7 148 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 PPP1R27Q86WC6 154 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 OR51G1Q8NGK1 321 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 BADQ92934 168 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 ZMYND19Q96E35 227 aaPredicted RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 GGTLC1Q9BX51 225 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 TM2D2Q9BX73 214 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 MMP26Q9NRE1 261 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 C1RLQ9NZP8 487 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 RNF181Q9P0P0 153 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 ASF1AQ9Y294 204 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 SOX21Q9Y651 276 aaPredicted RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 HS3ST3B1Q9Y662 390 aa4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 BAZ2AQ9UIF9 1905 aaKnown RBP4.91□□□□□ -1.62
COL4A3BP-207ENST00000604926 KLF18A0A0U1RQI7 1052 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 HRASP01112 189 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 KRASP01116 189 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 IGLC6P0CF74 106 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 EPCAMP16422 314 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 SNCAP37840 140 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 GUCA1AP43080 201 aaPredicted RBP4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 OR1E2P47887 323 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 INPP1P49441 399 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 NUDT2P50583 147 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 RPS14P62263 151 aaKnown RBP4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 Q71RC1 249 aaPredicted RBP4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 SUMF2Q8NBJ7 301 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 GJC3Q8NFK1 279 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 MBD3L2Q8NHZ7 208 aaPredicted RBP4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 KLK6Q92876 244 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 PGLYRP3Q96LB9 341 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 DERL3Q96Q80 235 aa4.9□□□□□ -1.62
COL4A3BP-207ENST00000604926 TMEM222Q9H0R3 208 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms