RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 LEUTXA8MZ59 168 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 OOSP1A8MZH6 123 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 LY6LH3BQJ8 138 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 BUB1B-PAK6H3BSN5 160 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 TRIM77I1YAP6 450 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 HOXA3O43365 443 aaPredicted RBP11.24□□□□□ -0.61
RNF40-212ENST00000602784 DIRAS3O95661 229 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 FCGR3AP08637 254 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 TALDO1P37837 337 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 KIR2DS4P43632 304 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 KIR2DS1Q14954 304 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 SLC9A3R2Q15599 337 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 LTC4SQ16873 150 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 LDLRAD2Q5SZI1 272 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 LHFPL4Q7Z7J7 247 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 PRR18Q8N4B5 295 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 SETD6Q8TBK2 473 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 DYNC2LI1Q8TCX1 351 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 C17orf50Q8WW18 174 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 RBM38Q9H0Z9 239 aaKnown RBP11.24□□□□□ -0.61
RNF40-212ENST00000602784 CCDC59Q9P031 241 aaKnown RBP11.24□□□□□ -0.61
RNF40-212ENST00000602784 COMMD3Q9UBI1 195 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 GNG12Q9UBI6 72 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
RNF40-212ENST00000602784 FAM172BPA6NC97 362 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 TMEM235A6NFC5 223 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 YPEL1O60688 119 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 RGS11O94810 467 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
RNF40-212ENST00000602784 DYNLT3P51808 116 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 UBA52P62987 128 aaKnown RBP11.23□□□□□ -0.61
RNF40-212ENST00000602784 HLA-DRB3P79483 266 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 MADCAM1Q13477 382 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 SSX2Q16385 188 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 MORN2Q502X0 79 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
RNF40-212ENST00000602784 ZNF439Q8NDP4 499 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 OR4A4PQ8NGN8 299 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 OR5R1Q8NH85 324 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 FAM216AQ8WUB2 273 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 LEAP2Q969E1 77 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 YPEL2Q96QA6 119 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 OCSTAMPQ9BR26 566 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
RNF40-212ENST00000602784 IGHV3-43A0A0B4J1X8 118 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 SMIM31A0A1B0GVY4 71 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 IGHV3-43DP0DP04 118 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 GNG2P59768 71 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 LRRC75BQ2VPJ9 315 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 CCDC144NLQ6NUI1 221 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 DYNAPQ8N1N2 210 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 OR10X1Q8NGY0 326 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 IL1F10Q8WWZ1 152 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 TMEM158Q8WZ71 300 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 SSX3Q99909 188 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 NDUFA13Q9P0J0 144 aa11.22□□□□□ -0.61
RNF40-212ENST00000602784 ELF5Q9UKW6 265 aaPredicted RBP11.22□□□□□ -0.61
RNF40-212ENST00000602784 BTBD17A6NE02 478 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 ITGB1BP1O14713 200 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 FABP7O15540 132 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 SSX5O60225 188 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 HPGDSO60760 199 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 TPPPO94811 219 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 IGHV3-7P01780 117 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 IGHV4-59P01825 116 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 EIF4EP06730 217 aaKnown RBP11.21□□□□□ -0.61
RNF40-212ENST00000602784 SCTP09683 121 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 ELK1P19419 428 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 ZBTB25P24278 435 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 MNDAP41218 407 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 GNG10P50151 68 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 ARHGDIBP52566 201 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 ZNF134P52741 427 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 ZNF137PP52743 207 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 RPL15P61313 204 aaKnown RBP11.21□□□□□ -0.61
RNF40-212ENST00000602784 CT45A1Q5HYN5 189 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 TMEM69Q5SWH9 247 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 TPTE2P1Q5T6R2 138 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 C16orf87Q6PH81 154 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 C5orf24Q7Z6I8 188 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 OR52L2PQ8NGH6 319 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 CT45A3Q8NHU0 189 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 RSL24D1Q9UHA3 163 aaKnown RBP11.21□□□□□ -0.61
RNF40-212ENST00000602784 ZNF230Q9UIE0 474 aaPredicted RBP11.21□□□□□ -0.61
RNF40-212ENST00000602784 HILPDAQ9Y5L2 63 aa11.21□□□□□ -0.61
RNF40-212ENST00000602784 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.62
RNF40-212ENST00000602784 CCDC160A6NGH7 325 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 IL3RAP26951 378 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 PPP1CCP36873 323 aaKnown RBP11.2□□□□□ -0.62
RNF40-212ENST00000602784 CBX5P45973 191 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 GNMTQ14749 295 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 FAM53AQ6NSI3 398 aaPredicted RBP11.2□□□□□ -0.62
RNF40-212ENST00000602784 OR10V1Q8NGI7 309 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 PIFOQ8TCI5 191 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 NUDCD2Q8WVJ2 157 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 ST6GALNAC6Q969X2 333 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 CABLES2Q9BTV7 478 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms