RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SIGIRRQ6IA17 410 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 RAB12Q6IQ22 244 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 C5orf24Q7Z6I8 188 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 ODF3L1Q8IXM7 274 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 STX19Q8N4C7 294 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 RDH12Q96NR8 316 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 ETAA1Q9NY74 926 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 GNG12Q9UBI6 72 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 TRAPPC2LQ9UL33 140 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 MRPS28Q9Y2Q9 187 aaKnown RBP14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 HUWE1Q7Z6Z7 4374 aaKnown RBP14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 LSAMPQ13449 338 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 MORN2Q502X0 79 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 ASPHD1Q5U4P2 390 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 C10orf67Q8IYJ2 551 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 ZFP41Q8N8Y5 198 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 KLK15Q9H2R5 256 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 MBNL3Q9NUK0 354 aaKnown RBP14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 SMPD3Q9NY59 655 aaPredicted RBP14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 EXOSC1Q9Y3B2 195 aaKnown RBP14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 PEX16Q9Y5Y5 336 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 U3KQK5 164 aa14.02□□□□□ -0.17
CHMP2A-208ENST00000601220 A0A1W2PPK0 400 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 SEC14L6B5MCN3 397 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 VDAC1P21796 283 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 ECI1P42126 302 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 DOC2BQ14184 412 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 CDH26Q8IXH8 852 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 OR11H1Q8NG94 326 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 CHCHD6Q9BRQ6 235 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 BANF2Q9H503 90 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 TAF9BQ9HBM6 251 aa14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 ZNF107Q9UII5 783 aaPredicted RBP14.01□□□□□ -0.17
CHMP2A-208ENST00000601220 IRGMA1A4Y4 181 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 FAM90A10PA6NDY2 464 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 FAM90A7PA6NKC0 464 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 FAM90A23PA8MXZ1 464 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 I3L521 148 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 CA11O75493 328 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 IGLV1-40P01703 118 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 GLAP06280 429 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 RUNX1Q01196 453 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 GNMTQ14749 295 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 PRR18Q8N4B5 295 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 JAGN1Q8N5M9 183 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 ZNF491Q8N8L2 437 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 ZNF555Q8NEP9 628 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 OR52L2PQ8NGH6 319 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 GGHQ92820 318 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 TMEM80Q96HE8 168 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 Q96M66 194 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 OR14A2Q96R54 314 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 GNB4Q9HAV0 340 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 RAB9BQ9NP90 201 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 CKLFQ9UBR5 152 aa14□□□□□ -0.17
CHMP2A-208ENST00000601220 DNAH7Q8WXX0 4024 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 G3V318 75 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 SLC2A2P11168 524 aaPredicted RBP13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 MGMTP16455 207 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 MYL12AP19105 171 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 FUT3P21217 361 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 CNTFRP26992 372 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 C6orf141Q5SZD1 244 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 TRAT1Q6PIZ9 186 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 MRPL30Q8TCC3 161 aaKnown RBP13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 UBE2E2Q96LR5 201 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 DERL3Q96Q80 235 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 SELENOIQ9C0D9 397 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 OR2S2Q9NQN1 319 aa13.99□□□□□ -0.17
CHMP2A-208ENST00000601220 IGHV7-81A0A0B4J1V7 117 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 UBE2QL1A1L167 161 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 MAS1P04201 325 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 OR5H8P0DN80 308 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 MYF6P23409 242 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 ACTBP60709 375 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 MMDQ15546 238 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 ZNF260Q3ZCT1 412 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 AWAT2Q6E213 333 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 LAIR2Q6ISS4 152 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 ZNF554Q86TJ5 538 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 NABP2Q9BQ15 211 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 MRPL20Q9BYC9 149 aaKnown RBP13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 OR51J1Q9H342 316 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 WSB1Q9Y6I7 421 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 STAB2Q8WWQ8 2551 aa13.98□□□□□ -0.17
CHMP2A-208ENST00000601220 ATP6V0E1O15342 81 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 HLA-DRB1P01911 266 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 CD1AP06126 327 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 PPP1CCP36873 323 aaKnown RBP13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 GNB1P62873 340 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 HTD2P86397 168 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 C19orf54Q5BKX5 351 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 LY6G6FQ5SQ64 297 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 ZNF833PQ6ZTB9 187 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 MINDY2Q8NBR6 621 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 NPBQ8NG41 125 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 OR1N2Q8NGR9 330 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 ASCL2Q99929 193 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 ABHD14AQ9BUJ0 271 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms