RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 H1FOOQ8IZA3 346 aaPredicted RBP15.66■□□□□ 0.1
UPF1-210ENST00000600689 OR4F5Q8NH21 305 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 OR4F4Q96R69 305 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 CISD1Q9NZ45 108 aaKnown RBP15.66■□□□□ 0.1
UPF1-210ENST00000600689 DFFBO76075 338 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 BAXQ07812 192 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 ZNF295-AS1Q8N0V1 137 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 FREM1Q5H8C1 2179 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 CD300LBA8K4G0 201 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 B4DEV8 164 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 TP53I11O14683 189 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 CXCL13O43927 109 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 IL18BPO95998 194 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 MDH2P40926 338 aaKnown RBP15.66■□□□□ 0.1
UPF1-210ENST00000600689 BSXQ3C1V8 233 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 CST9LP1Q5W188 147 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 AAED1Q7RTV5 226 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 FAM185AQ8N0U4 392 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 OR8G5Q8NG78 346 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 IFI44Q8TCB0 444 aa15.66■□□□□ 0.1
UPF1-210ENST00000600689 ZNF816-ZNF321PA0A0X1KG74 233 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 TRAPPC6AO75865 159 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 WNT5AP41221 380 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 SPINK9Q5DT21 86 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 OR2V1Q8NHB1 315 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 ZNF845Q96IR2 970 aaPredicted RBP15.65■□□□□ 0.1
UPF1-210ENST00000600689 OR4C12Q96R67 309 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 ETV2O00321 342 aaPredicted RBP15.65■□□□□ 0.1
UPF1-210ENST00000600689 WDR1O75083 606 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 HNF1AP20823 631 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 UCP1P25874 307 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 RND2P52198 227 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 SPCS3P61009 180 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 ZXDAP98168 799 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 BATFQ16520 125 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 TMEM241Q24JQ0 296 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 OR1A1Q9P1Q5 309 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 VAX2Q9UIW0 290 aa15.65■□□□□ 0.1
UPF1-210ENST00000600689 SYNGR1O43759 233 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 EDN3P14138 238 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 RPL29P47914 159 aaKnown RBP15.64■□□□□ 0.09
UPF1-210ENST00000600689 PNRC1Q12796 327 aaPredicted RBP15.64■□□□□ 0.09
UPF1-210ENST00000600689 SLC10A1Q14973 349 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 TMPRSS7Q7RTY8 843 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 C2orf88Q9BSF0 95 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 NDUFAF3Q9BU61 184 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 hCG_38984A0A1B0GV85 526 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 IGKV1D-33P01593 117 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 IGKV1-33P01594 117 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 HAPLN4Q86UW8 402 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 OR5R1Q8NH85 324 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 CDH20Q9HBT6 801 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 TRBV24-1A0A075B6N3 115 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 ZNF705FA8MVS1 300 aaPredicted RBP15.64■□□□□ 0.09
UPF1-210ENST00000600689 ZIC3O60481 467 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 ZNF705DP0CH99 300 aaPredicted RBP15.64■□□□□ 0.09
UPF1-210ENST00000600689 ZNF705BP0CI00 300 aaPredicted RBP15.64■□□□□ 0.09
UPF1-210ENST00000600689 CCL4P13236 92 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 F2RP25116 425 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 PAX5Q02548 391 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 OR10V1Q8NGI7 309 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 C10orf35Q96D05 121 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 FOXB1Q99853 325 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 WNT5BQ9H1J7 359 aa15.64■□□□□ 0.09
UPF1-210ENST00000600689 A6NNC1 897 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 SYNGR2O43760 224 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 CLDN1O95832 211 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 CRYAAP02489 173 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 CD81P60033 236 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 HIST1H3AP68431 136 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 TEX38Q6PEX7 206 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 GUCD1Q96NT3 240 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 SRD5A3Q9H8P0 318 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 TMEM38BQ9NVV0 291 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 DVL1O14640 695 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 TUSC2O75896 110 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 ZNF25P17030 456 aaPredicted RBP15.63■□□□□ 0.09
UPF1-210ENST00000600689 SNHG12Q9BXW3 62 aa15.63■□□□□ 0.09
UPF1-210ENST00000600689 NUBP1P53384 320 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 UBE2G2P60604 165 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 RPL23P62829 140 aaKnown RBP15.62■□□□□ 0.09
UPF1-210ENST00000600689 VASH2Q86V25 355 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 ZNF525Q8N782 197 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 FADS6Q8N9I5 356 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 OR2H1Q9GZK4 316 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 IL17BQ9UHF5 180 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 A0A0G2JMM0 328 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 A0A1W2PPB8 328 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 A0A1W2PRS3 328 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 PGPEP1LA6NFU8 196 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 KIR3DP1A8MWS1 328 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 SRYQ05066 204 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 SP5Q6BEB4 398 aaPredicted RBP15.62■□□□□ 0.09
UPF1-210ENST00000600689 MRPL14Q6P1L8 145 aaKnown RBP15.62■□□□□ 0.09
UPF1-210ENST00000600689 ZNF705AQ6ZN79 300 aaPredicted RBP15.62■□□□□ 0.09
UPF1-210ENST00000600689 RPP25LQ8N5L8 163 aaKnown RBP15.62■□□□□ 0.09
UPF1-210ENST00000600689 CPEB3Q8NE35 698 aaKnown RBP15.62■□□□□ 0.09
UPF1-210ENST00000600689 MRPL30Q8TCC3 161 aaKnown RBP15.62■□□□□ 0.09
UPF1-210ENST00000600689 ABHD3Q8WU67 409 aa15.62■□□□□ 0.09
UPF1-210ENST00000600689 MRPL37Q9BZE1 423 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms