RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 OR8H2Q8N162 312 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 OR5R1Q8NH85 324 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 ABHD1Q96SE0 405 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 LYSTQ99698 3801 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 SERPINE3A8MV23 424 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 H3BUX3 64 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 DVL1O14640 695 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 MGST3O14880 152 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 ERP29P30040 261 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 KIR2DS4P43632 304 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 DLX1P56177 255 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 NKAPLQ5M9Q1 402 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 HACD4Q5VWC8 232 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 RSBN1Q5VWQ0 802 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 PYHIN1Q6K0P9 492 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 MFSD4AQ8N468 514 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 PNKDQ8N490 385 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 ASCC1Q8N9N2 400 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 MUC7Q8TAX7 377 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 PLPPR1Q8TBJ4 325 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 COQ2Q96H96 371 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 CHST6Q9GZX3 395 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 NCOR1P1Q9H4R4 102 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 SIRT7Q9NRC8 400 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 AK3Q9UIJ7 227 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 ELF5Q9UKW6 265 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 PCLOQ9Y6V0 5065 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 DNAH7Q8WXX0 4024 aa11.22□□□□□ -0.61
SHKBP1-218ENST00000598907 TRBV6-6A0A0A6YYG2 114 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 UBE2QL1A1L167 161 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 CTDSPLO15194 276 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 NDUFB3O43676 98 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 NAPSAO96009 420 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 PF4V1P10720 104 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 NPY4RP50391 375 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 KLRD1Q13241 179 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 HABP2Q14520 560 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 GRK1Q15835 563 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 ZNF79Q15937 498 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 SPANXN2Q5MJ10 180 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 ZNF497Q6ZNH5 498 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 FGFRL1Q8N441 504 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 C15orf40Q8WUR7 153 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 SLC25A10Q9UBX3 287 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-218ENST00000598907 TMEM235A6NFC5 223 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 HSPB6O14558 160 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 NPFFO15130 113 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 SSX5O60225 188 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 PF4P02776 101 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 MT-ND4P03905 459 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 PTHLHP12272 177 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 PITPNAQ00169 270 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 ZNF45Q02386 682 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 IL18Q14116 193 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 ATXN7L3Q14CW9 347 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 C11orf91Q3C1V1 193 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 LRRC10Q5BKY1 277 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 FAM131AQ6UXB0 335 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 TMEM185AQ8NFB2 350 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 S100ZQ8WXG8 99 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 ETAA1Q9NY74 926 aa11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 MRPS7Q9Y2R9 242 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-218ENST00000598907 MEIOCA2RUB1 952 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 SULT1C2O00338 296 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 NHLRC4P0CG21 123 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 PRSS3P35030 304 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 SAA4P35542 130 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 P2RX3P56373 397 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 AESQ08117 197 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 MADCAM1Q13477 382 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 ZNF880Q6PDB4 577 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 BTN2A1Q7KYR7 527 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 MRPL30Q8TCC3 161 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 GPX8Q8TED1 209 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 CMSS1Q9BQ75 279 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 HDHD3Q9BSH5 251 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 SRRQ9GZT4 340 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 RIMS4Q9H426 269 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 RANBP3Q9H6Z4 567 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 SCPEP1Q9HB40 452 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 PALMDQ9NP74 551 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 ANAPC10Q9UM13 185 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 HERC2O95714 4834 aa11.19□□□□□ -0.62
SHKBP1-218ENST00000598907 KIAA2026Q5HYC2 2103 aa11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 TMEM30CPA0ZSE6 113 aa11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 FUOMA2VDF0 154 aa11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 GABARAPH6UMI1 98 aa11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 GSTZ1O43708 216 aaPredicted RBP11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 CD3GP09693 182 aa11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 CGB3P0DN86 165 aa11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 CGB7P0DN87 165 aa11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 GLIPR1P48060 266 aa11.18□□□□□ -0.62
SHKBP1-218ENST00000598907 MRPS10P82664 201 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms