RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SSNA1O43805 119 aa19.28■□□□□ 0.68
SYMPK-212ENST00000598896 TRAPPC2P0DI81 140 aa19.28■□□□□ 0.68
SYMPK-212ENST00000598896 TRAPPC2BP0DI82 140 aa19.28■□□□□ 0.68
SYMPK-212ENST00000598896 RPS2P15880 293 aaKnown RBP19.28■□□□□ 0.68
SYMPK-212ENST00000598896 VAMP1P23763 118 aa19.28■□□□□ 0.68
SYMPK-212ENST00000598896 LYG2Q86SG7 212 aa19.28■□□□□ 0.68
SYMPK-212ENST00000598896 AKAP14Q86UN6 197 aa19.28■□□□□ 0.68
SYMPK-212ENST00000598896 OR11H7Q8NGC8 314 aa19.28■□□□□ 0.68
SYMPK-212ENST00000598896 H1FXQ92522 213 aaKnown RBP19.28■□□□□ 0.68
SYMPK-212ENST00000598896 CORO2AQ92828 525 aa19.28■□□□□ 0.68
SYMPK-212ENST00000598896 HELZ2Q9BYK8 2649 aaKnown RBP19.28■□□□□ 0.68
SYMPK-212ENST00000598896 KBTBD11-OT1A0A1B0GTJ5 212 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 C9orf170A2RU37 121 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 PPP1CCP36873 323 aaKnown RBP19.27■□□□□ 0.68
SYMPK-212ENST00000598896 PIGPP57054 158 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 HTD2P86397 168 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 PHLDA2Q53GA4 152 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 CD276Q5ZPR3 534 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 OR10V1Q8NGI7 309 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 SLC2A9Q9NRM0 540 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 CLN8Q9UBY8 286 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 LINC00312Q9Y6C7 94 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 CELSR2Q9HCU4 2923 aa19.27■□□□□ 0.68
SYMPK-212ENST00000598896 hADV38S2A0JD32 116 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 F2RL2O00254 374 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 CXCL3P19876 107 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 LOXL3P58215 753 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 MEF2CQ06413 473 aaPredicted RBP19.26■□□□□ 0.67
SYMPK-212ENST00000598896 ZNF818PQ6ZRF7 136 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 SLC5A7Q9GZV3 580 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 TOLLIPQ9H0E2 274 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 NARFLQ9H6Q4 476 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 CCL28Q9NRJ3 127 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 GPR6P46095 362 aaPredicted RBP19.26■□□□□ 0.67
SYMPK-212ENST00000598896 UTF1Q5T230 341 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 TMEM200BQ69YZ2 307 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 CSMD2Q7Z408 3487 aa19.26■□□□□ 0.67
SYMPK-212ENST00000598896 DOPEY2Q9Y3R5 2298 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 CCNKO75909 580 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 WNT2P09544 360 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 SULT1A3P0DMM9 295 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 SULT1A4P0DMN0 295 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 NINJ1Q92982 152 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 LINC00574Q9H8X3 128 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 MIOXQ9UGB7 285 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 UBE2J1Q9Y385 318 aaPredicted RBP19.25■□□□□ 0.67
SYMPK-212ENST00000598896 DOCK11Q5JSL3 2073 aa19.25■□□□□ 0.67
SYMPK-212ENST00000598896 CRYM-AS1A6NIL9 109 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 ZNF729A6NN14 1252 aaPredicted RBP19.24■□□□□ 0.67
SYMPK-212ENST00000598896 HSD17B6O14756 317 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 IGLV2-14P01704 120 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 CCL3L1P16619 93 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 ABCA11PQ4W5N1 156 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 SPICQ8N5J4 248 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 CASTOR1Q8WTX7 329 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 ST6GAL2Q96JF0 529 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 PRR13Q9NZ81 148 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 JPT1Q9UK76 154 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 ASH1LQ9NR48 2969 aaKnown RBP19.24■□□□□ 0.67
SYMPK-212ENST00000598896 SPG11Q96JI7 2443 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 MMP23AO75900 390 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 OR8U9P0C7N5 309 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 LUMP51884 338 aaPredicted RBP19.24■□□□□ 0.67
SYMPK-212ENST00000598896 ERVFRD-1P60508 538 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 CD83Q01151 205 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 SLC9A3R2Q15599 337 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 C2orf68Q2NKX9 166 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 OR8B3Q8NGG8 313 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 OR8U1Q8NH10 309 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 RTN4IP1Q8WWV3 396 aaPredicted RBP19.24■□□□□ 0.67
SYMPK-212ENST00000598896 NEIL1Q96FI4 390 aaPredicted RBP19.24■□□□□ 0.67
SYMPK-212ENST00000598896 PSMG3-AS1Q96PY0 264 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 OR8B2Q96RD0 313 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 GPHA2Q96T91 129 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 GNG12Q9UBI6 72 aa19.24■□□□□ 0.67
SYMPK-212ENST00000598896 YLPM1P49750 1951 aaKnown RBP19.23■□□□□ 0.67
SYMPK-212ENST00000598896 SFT2D2O95562 160 aa19.23■□□□□ 0.67
SYMPK-212ENST00000598896 LPCAT3Q6P1A2 487 aa19.23■□□□□ 0.67
SYMPK-212ENST00000598896 NLRC3Q7RTR2 1065 aa19.23■□□□□ 0.67
SYMPK-212ENST00000598896 FAM185AQ8N0U4 392 aa19.23■□□□□ 0.67
SYMPK-212ENST00000598896 UXS1Q8NBZ7 420 aa19.23■□□□□ 0.67
SYMPK-212ENST00000598896 MITD1Q8WV92 249 aa19.23■□□□□ 0.67
SYMPK-212ENST00000598896 ZNF486Q96H40 463 aaPredicted RBP19.23■□□□□ 0.67
SYMPK-212ENST00000598896 RANGRFQ9HD47 186 aaPredicted RBP19.23■□□□□ 0.67
SYMPK-212ENST00000598896 TAS2R3Q9NYW6 316 aa19.23■□□□□ 0.67
SYMPK-212ENST00000598896 MALRD1Q5VYJ5 2156 aa19.23■□□□□ 0.67
SYMPK-212ENST00000598896 DUS4LO95620 317 aaKnown RBP19.22■□□□□ 0.67
SYMPK-212ENST00000598896 MORN2Q502X0 79 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 WDR25Q64LD2 544 aaPredicted RBP19.22■□□□□ 0.67
SYMPK-212ENST00000598896 LIN54Q6MZP7 749 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 C12orf45Q8N5I9 185 aaPredicted RBP19.22■□□□□ 0.67
SYMPK-212ENST00000598896 ZNF714Q96N38 554 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 PATZ1Q9HBE1 687 aaKnown RBP19.22■□□□□ 0.67
SYMPK-212ENST00000598896 GPR31O00270 319 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 IGHV3-7P01780 117 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 KRTAP10-9P60411 292 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 PRAMEF5Q5TYX0 476 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 ZNF787Q6DD87 383 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 OR2AK2Q8NG84 335 aa19.22■□□□□ 0.67
SYMPK-212ENST00000598896 FYTTD1Q96QD9 318 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms