RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 LRRC10Q5BKY1 277 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 AVPI1Q5T686 147 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 CYB5R2Q6BCY4 276 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 SIGIRRQ6IA17 410 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 PYHIN1Q6K0P9 492 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 TMEM88Q6PEY1 159 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 CCDC190Q86UF4 302 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 OR8H2Q8N162 312 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 CD177Q8N6Q3 437 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 ASCC1Q8N9N2 400 aaKnown RBP8.56□□□□□ -1.04
SMG9-207ENST00000598860 SUMF2Q8NBJ7 301 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 C19orf18Q8NEA5 215 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 OR4M1Q8NGD0 313 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 OR5T2Q8NGG2 359 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 NEK7Q8TDX7 302 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 SEH1LQ96EE3 360 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 GAFA1Q96PS6 74 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 PECRQ9BY49 303 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 BPESC1Q9GZL8 116 aa8.56□□□□□ -1.04
SMG9-207ENST00000598860 RIMS4Q9H426 269 aaPredicted RBP8.56□□□□□ -1.04
SMG9-207ENST00000598860 PATZ1Q9HBE1 687 aaKnown RBP8.56□□□□□ -1.04
SMG9-207ENST00000598860 ABCA2Q9BZC7 2435 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 VPS13CQ709C8 3753 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 TRAV18A0A075B6X5 111 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 TRAV24A0A0B4J272 114 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 FABP12A6NFH5 140 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 A8MV72 311 aaPredicted RBP8.55□□□□□ -1.04
SMG9-207ENST00000598860 F5H0A9 414 aaPredicted RBP8.55□□□□□ -1.04
SMG9-207ENST00000598860 K7N7A8 449 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 SULT1C2O00338 296 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 NDUFB3O43676 98 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 MELTFP08582 738 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 CEBPDP49716 269 aaPredicted RBP8.55□□□□□ -1.04
SMG9-207ENST00000598860 TMEM50BP56557 158 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 FOXI1Q12951 378 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 IL18Q14116 193 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 MOGAT2Q3SYC2 334 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 ZNF260Q3ZCT1 412 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 BEND2Q8NDZ0 799 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 TMEM185AQ8NFB2 350 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 ARHGAP5-AS1Q96IT6 56 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 CCL13Q99616 98 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 PPA2Q9H2U2 334 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 NCOR1P1Q9H4R4 102 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 SCPEP1Q9HB40 452 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 SLC25A10Q9UBX3 287 aaPredicted RBP8.55□□□□□ -1.04
SMG9-207ENST00000598860 MAB21L2Q9Y586 359 aa8.55□□□□□ -1.04
SMG9-207ENST00000598860 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMG9-207ENST00000598860 ARHGAP32A7KAX9 2087 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 A0A087X0M5 115 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 IGHV4-61A0A0C4DH41 118 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 A0A1B0GX30 115 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 TMEM30CPA0ZSE6 113 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 CTDSPLO15194 276 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 CRLF1O75462 422 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 CD3GP09693 182 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 IGHV4-31P0DP07 118 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 ERP29P30040 261 aaKnown RBP8.54□□□□□ -1.04
SMG9-207ENST00000598860 CBX5P45973 191 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 OR3A1P47881 315 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 GNG2P59768 71 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 RPP30P78346 268 aaKnown RBP8.54□□□□□ -1.04
SMG9-207ENST00000598860 HOXA4Q00056 320 aaPredicted RBP8.54□□□□□ -1.04
SMG9-207ENST00000598860 ARFRP1Q13795 201 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 GRK1Q15835 563 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 CDNFQ49AH0 187 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 HACD4Q5VWC8 232 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 SLC35E4Q6ICL7 350 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 FAM131AQ6UXB0 335 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 Q6ZPA2 131 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 C17orf107Q6ZR85 190 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 GDPD3Q7L5L3 318 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 MOB1BQ7L9L4 216 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 C6orf201Q7Z4U5 140 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 FAM216BQ8N7L0 139 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 CMSS1Q9BQ75 279 aaKnown RBP8.54□□□□□ -1.04
SMG9-207ENST00000598860 PRDM13Q9H4Q3 707 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 AUNIPQ9H7T9 357 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 C12orf4Q9NQ89 552 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 MGAT4AQ9UM21 535 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 ZFHX3Q15911 3703 aa8.54□□□□□ -1.04
SMG9-207ENST00000598860 TRBV6-6A0A0A6YYG2 114 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 TMEM235A6NFC5 223 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 NPIPB5A8MRT5 1133 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 GABARAPH6UMI1 98 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 ECDO95905 644 aaPredicted RBP8.53□□□□□ -1.04
SMG9-207ENST00000598860 IGHV2-5P01817 119 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 WNT2P09544 360 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 GNB3P16520 340 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 DTYMKP23919 212 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 PRSS3P35030 304 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 P2RX3P56373 397 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 GNB2P62879 340 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 SSBP1Q04837 148 aaKnown RBP8.53□□□□□ -1.04
SMG9-207ENST00000598860 ZNF846Q147U1 533 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 ATXN7L3Q14CW9 347 aaPredicted RBP8.53□□□□□ -1.04
SMG9-207ENST00000598860 ESCO2Q56NI9 601 aa8.53□□□□□ -1.04
SMG9-207ENST00000598860 RSBN1Q5VWQ0 802 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms