RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DCSTAMPQ9H295 470 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 KCNK7Q9Y2U2 307 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 A0A1W2PPE3 182 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 BUB1B-PAK6H3BSN5 160 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 AANATQ16613 207 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 C5orf24Q7Z6I8 188 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 OR10X1Q8NGY0 326 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 SLC25A38Q96DW6 304 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 Q9N2K0 584 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 OR2S2Q9NQN1 319 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 VPREB3Q9UKI3 123 aa15.9■□□□□ 0.14
SHKBP1-214ENST00000597396 POM121CA8CG34 1229 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 NOL3O60936 208 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 CRYBA1P05813 215 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 TALDO1P37837 337 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 ARHGDIBP52566 201 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 HLA-DRB3P79483 266 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 Q3ZCU0 254 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 CDNFQ49AH0 187 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 FAM53AQ6NSI3 398 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 Q6ZPA2 131 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 IL1F10Q8WWZ1 152 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 KCTD12Q96CX2 325 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 JPT1Q9UK76 154 aa15.89■□□□□ 0.13
SHKBP1-214ENST00000597396 RGS11O94810 467 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 GSTP1P09211 210 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 RORCP51449 518 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 HTD2P86397 168 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 MADCAM1Q13477 382 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 LY6EQ16553 131 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 TPTE2P1Q5T6R2 138 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 OR52L2PQ8NGH6 319 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 RAB2BQ8WUD1 216 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 TOMM40LQ969M1 308 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 RPEQ96AT9 228 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 DIABLOQ9NR28 239 aa15.88■□□□□ 0.13
SHKBP1-214ENST00000597396 FAM181BA6NEQ2 426 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 VGLL3A8MV65 326 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 GPR137BO60478 399 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 FCGR3AP08637 254 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 IL3RAP26951 378 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 GNMTQ14749 295 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 UBE2NLQ5JXB2 153 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 CCDC144NLQ6NUI1 221 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 LINC00311Q8N616 119 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 SAMD12Q8N8I0 201 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 C8orf31Q8N9H6 132 aa15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 GCDHQ92947 438 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-214ENST00000597396 TRAV18A0A075B6X5 111 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 A0A0A6YYH2 397 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 TMEM235A6NFC5 223 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 A6NJ64 397 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 OOSP1A8MZH6 123 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 BRS3P32247 399 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 PPP1CCP36873 323 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 MNDAP41218 407 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 RAB13P51153 203 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 TMBIM6P55061 237 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 GNG2P59768 71 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 MORN2Q502X0 79 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 HACD4Q5VWC8 232 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 STEAP3Q658P3 488 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 IZUMO1Q8IYV9 350 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 ACOT12Q8WYK0 555 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 S100A16Q96FQ6 103 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 BCL7BQ9BQE9 202 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 OCSTAMPQ9BR26 566 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 COMMD3Q9UBI1 195 aa15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 ELF5Q9UKW6 265 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-214ENST00000597396 TRDCB7Z8K6 153 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 LY6LH3BQJ8 138 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 HAX1O00165 279 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 SLC31A2O15432 143 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 HSPA12AO43301 675 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 YPEL1O60688 119 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 SCTP09683 121 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 KIR2DS4P43632 304 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 DYNLT3P51808 116 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 PITPNAQ00169 270 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 KIR2DS1Q14954 304 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 PNLIPRP3Q17RR3 467 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 ZNF260Q3ZCT1 412 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 SLC25A48Q6ZT89 311 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 ZNF439Q8NDP4 499 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 AP3S1Q92572 193 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 YPEL2Q96QA6 119 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 ABCG5Q9H222 651 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 SLC23A1Q9UHI7 598 aa15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 ZNF230Q9UIE0 474 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-214ENST00000597396 HKR1P10072 659 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 ZNF182P17025 639 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 RAB7AP51149 207 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 RPL15P61313 204 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 CT45A1Q5HYN5 189 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 DHRS7BQ6IAN0 325 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 MZT2AQ6P582 158 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 CT45A3Q8NHU0 189 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 PIFOQ8TCI5 191 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 NUDCD2Q8WVJ2 157 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms