RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 CREB3L1Q96BA8 519 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 NXF2Q9GZY0 626 aaKnown RBP11.67□□□□□ -0.54
VRK3-213ENST00000597215 MIXL1Q9H2W2 232 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 EXTL2Q9UBQ6 330 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 ZNF230Q9UIE0 474 aaPredicted RBP11.67□□□□□ -0.54
VRK3-213ENST00000597215 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 AMMECR1Q9Y4X0 333 aaPredicted RBP11.67□□□□□ -0.54
VRK3-213ENST00000597215 SOX21Q9Y651 276 aaPredicted RBP11.67□□□□□ -0.54
VRK3-213ENST00000597215 MINOS1-NBL1R4GNA1 71 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 MDFIC2A0A1B0GVS7 189 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 J3QR06 171 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 FABP7O15540 132 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 SSX5O60225 188 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 IGHV3-7P01780 117 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 SCTP09683 121 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 HTR1DP28221 377 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 CBX5P45973 191 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 HLA-DRB5Q30154 266 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 UTF1Q5T230 341 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 FOXB2Q5VYV0 432 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 C5orf24Q7Z6I8 188 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 SIGLECL1Q8N7X8 197 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 C8orf31Q8N9H6 132 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 MAFIPQ8WZ33 124 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 ZDHHC16Q969W1 377 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 MALSU1Q96EH3 234 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 ZNF48Q96MX3 618 aaPredicted RBP11.66□□□□□ -0.54
VRK3-213ENST00000597215 ST6GALNAC5Q9BVH7 336 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 MMP28Q9H239 520 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 MRPS7Q9Y2R9 242 aaKnown RBP11.66□□□□□ -0.54
VRK3-213ENST00000597215 A3GALT2U3KPV4 340 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 NF1P21359 2839 aa11.66□□□□□ -0.54
VRK3-213ENST00000597215 ZFHX3Q15911 3703 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 A0A0A6YYJ9 748 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 HSPA12AO43301 675 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 TCF21O43680 179 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 YPEL1O60688 119 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 TPPPO94811 219 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 DIRAS3O95661 229 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 HLA-DQB1P01920 261 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 PTHLHP12272 177 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 PRSS3P35030 304 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 PPP1CCP36873 323 aaKnown RBP11.65□□□□□ -0.54
VRK3-213ENST00000597215 CEACAM3P40198 252 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 GNMTQ14749 295 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 MORN2Q502X0 79 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 LY6G6FQ5SQ64 297 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 CNIH2Q6PI25 160 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 LHFPL4Q7Z7J7 247 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 LINC00311Q8N616 119 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 OR52L2PQ8NGH6 319 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 OR10X1Q8NGY0 326 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 YPEL2Q96QA6 119 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 JMJD8Q96S16 334 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 OCSTAMPQ9BR26 566 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 CABLES2Q9BTV7 478 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 MMP27Q9H306 513 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 DPM3Q9P2X0 92 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 SLC23A1Q9UHI7 598 aa11.65□□□□□ -0.54
VRK3-213ENST00000597215 LEUTXA8MZ59 168 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 BUB1B-PAK6H3BSN5 160 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 GSTT2P0CG29 244 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 GSTT2BP0CG30 244 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 ZBTB25P24278 435 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 FAM53AQ6NSI3 398 aaPredicted RBP11.64□□□□□ -0.55
VRK3-213ENST00000597215 SLC25A48Q6ZT89 311 aaKnown RBP11.64□□□□□ -0.55
VRK3-213ENST00000597215 LDLRAD3Q86YD5 345 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 SNX29P2Q8IUI4 249 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 ZNF439Q8NDP4 499 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 C15orf40Q8WUR7 153 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 C17orf50Q8WW18 174 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 GCDHQ92947 438 aaPredicted RBP11.64□□□□□ -0.55
VRK3-213ENST00000597215 DIRAS2Q96HU8 199 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 AJUBAQ96IF1 538 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 SCPEP1Q9HB40 452 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 IFT46Q9NQC8 304 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 BATF3Q9NR55 127 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 RABL2AQ9UBK7 228 aaPredicted RBP11.64□□□□□ -0.55
VRK3-213ENST00000597215 RABL2BQ9UNT1 228 aa11.64□□□□□ -0.55
VRK3-213ENST00000597215 IGKV1-6A0A0C4DH72 117 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 A0A1W2PPE3 182 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 A6NHS1 94 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 SULT1C2O00338 296 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 BET1O15155 118 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 LPLP06858 475 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 IL3RAP26951 378 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 RIPPLY3P57055 190 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 HILS1P60008 231 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 BAMBIQ13145 260 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 MADCAM1Q13477 382 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 HERPUD1Q15011 391 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 SSX2Q16385 188 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 LDLRAD2Q5SZI1 272 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 Q6YL49 198 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 HOGA1Q86XE5 327 aa11.63□□□□□ -0.55
VRK3-213ENST00000597215 GVQW1Q8N7I0 195 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms