RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SRP14P37108 136 aaKnown RBP8.55□□□□□ -1.04
LIG1-210ENST00000596332 HLA-DRB3P79483 266 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 MADCAM1Q13477 382 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 LTC4SQ16873 150 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 MIDNQ504T8 468 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 IGSF11Q5DX21 431 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 LY6G6FQ5SQ64 297 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 C6orf183Q5T699 404 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 GPR157Q5UAW9 335 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 MZT2AQ6P582 158 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 LYSMD2Q8IV50 215 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 LINC00311Q8N616 119 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 ZDHHC22Q8N966 263 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 C8orf31Q8N9H6 132 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 BEND2Q8NDZ0 799 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 GPX8Q8TED1 209 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 SNAPC3Q92966 411 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 CABLES2Q9BTV7 478 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 CLEC7AQ9BXN2 247 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 MEGF9Q9H1U4 602 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 DIABLOQ9NR28 239 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 OR1A1Q9P1Q5 309 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 JMJD1CQ15652 2540 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 TRBV6-7A0A0A0MS04 114 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 hCG_1809904A0A1W2PP81 198 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 A0A1W2PPE2 198 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 A0A1W2PR64 198 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 A0A1W2PRV1 198 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 CCDC160A6NGH7 325 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 BUB1B-PAK6H3BSN5 160 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 SDCBPO00560 298 aaPredicted RBP8.54□□□□□ -1.04
LIG1-210ENST00000596332 YPEL1O60688 119 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 HNF1AP20823 631 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 NFYBP25208 207 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 SOX6P35712 828 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 PPP1CCP36873 323 aaKnown RBP8.54□□□□□ -1.04
LIG1-210ENST00000596332 SRSF2Q01130 221 aaKnown RBP8.54□□□□□ -1.04
LIG1-210ENST00000596332 ARL6IP1Q15041 203 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 HLA-DRB5Q30154 266 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 Q3ZCU0 254 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 OR52W1Q6IF63 320 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 CNIH2Q6PI25 160 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 TRAT1Q6PIZ9 186 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 Q6YL49 198 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 SLC25A48Q6ZT89 311 aaKnown RBP8.54□□□□□ -1.04
LIG1-210ENST00000596332 MOB1BQ7L9L4 216 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 HOGA1Q86XE5 327 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 SIGLECL1Q8N7X8 197 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 OR10V1Q8NGI7 309 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 OR13D1Q8NGV5 346 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 MCFD2Q8NI22 146 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 AP3S1Q92572 193 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 RBMXL1Q96E39 390 aaKnown RBP8.54□□□□□ -1.04
LIG1-210ENST00000596332 YPEL2Q96QA6 119 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 ZNF251Q9BRH9 671 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 ADAM30Q9UKF2 790 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 A3GALT2U3KPV4 340 aa8.54□□□□□ -1.04
LIG1-210ENST00000596332 MEIS3P1A6NDR6 274 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 FABP7O15540 132 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 SPINT2O43291 252 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 TPPPO94811 219 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 ARG1P05089 322 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 ZNF137PP52743 207 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 PITPNAQ00169 270 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 ARFRP1Q13795 201 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 TMEM69Q5SWH9 247 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 CCDC190Q86UF4 302 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 PRR18Q8N4B5 295 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 TEX29Q8N6K0 151 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 OR4A4PQ8NGN8 299 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 OR9G1Q8NH87 305 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 GALMQ96C23 342 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 C5orf30Q96GV9 206 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 ST6GALNAC5Q9BVH7 336 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 MS4A7Q9GZW8 240 aaPredicted RBP8.53□□□□□ -1.04
LIG1-210ENST00000596332 MMP28Q9H239 520 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 MMP27Q9H306 513 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 CHMP1AQ9HD42 196 aaPredicted RBP8.53□□□□□ -1.04
LIG1-210ENST00000596332 OR2S2Q9NQN1 319 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 EXTL2Q9UBQ6 330 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 JPT1Q9UK76 154 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 V9GYH0 126 aa8.53□□□□□ -1.04
LIG1-210ENST00000596332 DIRAS3O95661 229 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 IER3P46695 156 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 GNG10P50151 68 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 HILS1P60008 231 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 SLC9A3R2Q15599 337 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 CNPY1Q3B7I2 92 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 MINOS1Q5TGZ0 78 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 STEAP3Q658P3 488 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 ZNF660Q6AZW8 331 aaPredicted RBP8.52□□□□□ -1.05
LIG1-210ENST00000596332 CCBE1Q6UXH8 406 aaPredicted RBP8.52□□□□□ -1.05
LIG1-210ENST00000596332 SNX29P2Q8IUI4 249 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 H1FOOQ8IZA3 346 aaPredicted RBP8.52□□□□□ -1.05
LIG1-210ENST00000596332 OR6Q1Q8NGQ2 317 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 SETD6Q8TBK2 473 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 CFHR4Q92496 578 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 MALSU1Q96EH3 234 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 C11orf54Q9H0W9 315 aaPredicted RBP8.52□□□□□ -1.05
LIG1-210ENST00000596332 IFI27L2Q9H2X8 130 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms