RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 RAX2Q96IS3 184 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 Q96M66 194 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 DCLRE1BQ9H816 532 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 OR2S2Q9NQN1 319 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 CCL24O00175 119 aa13.37□□□□□ -0.27
CCDC9-202ENST00000595659 WNT4P56705 351 aa13.37□□□□□ -0.27
CCDC9-202ENST00000595659 GPR50Q13585 617 aa13.37□□□□□ -0.27
CCDC9-202ENST00000595659 FAM27D1Q5T7N8 215 aa13.37□□□□□ -0.27
CCDC9-202ENST00000595659 OR10K2Q6IF99 312 aa13.37□□□□□ -0.27
CCDC9-202ENST00000595659 GAPTQ8N292 157 aa13.37□□□□□ -0.27
CCDC9-202ENST00000595659 NANOGP1Q8N7R0 232 aa13.37□□□□□ -0.27
CCDC9-202ENST00000595659 CNOT2Q9NZN8 540 aaKnown RBP13.37□□□□□ -0.27
CCDC9-202ENST00000595659 SLC2A2P11168 524 aaPredicted RBP13.36□□□□□ -0.27
CCDC9-202ENST00000595659 MYF6P23409 242 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 PPP1CCP36873 323 aaKnown RBP13.36□□□□□ -0.27
CCDC9-202ENST00000595659 Q3ZCU0 254 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 MORN2Q502X0 79 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 CXorf66Q5JRM2 361 aaPredicted RBP13.36□□□□□ -0.27
CCDC9-202ENST00000595659 CDH26Q8IXH8 852 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 MRPL30Q8TCC3 161 aaKnown RBP13.36□□□□□ -0.27
CCDC9-202ENST00000595659 RITA1Q96K30 269 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 MCRIP2Q9BUT9 160 aaKnown RBP13.36□□□□□ -0.27
CCDC9-202ENST00000595659 GPR61Q9BZJ8 451 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 RAB9BQ9NP90 201 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 C8orf4Q9NR00 106 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 KCNIP1Q9NZI2 227 aa13.36□□□□□ -0.27
CCDC9-202ENST00000595659 DNAH9Q9NYC9 4486 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 FAM90A10PA6NDY2 464 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 FAM90A7PA6NKC0 464 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 FAM90A23PA8MXZ1 464 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 PDCD6O75340 191 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 SC5DO75845 299 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 SOX6P35712 828 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 ZNF137PP52743 207 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 GP2P55259 537 aaKnown RBP13.35□□□□□ -0.27
CCDC9-202ENST00000595659 LSAMPQ13449 338 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 ACSM3Q53FZ2 586 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 VAX1Q5SQQ9 334 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 FAM71E2Q8N5Q1 922 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 UQCC2Q9BRT2 126 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 TMED9Q9BVK6 235 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 KCNK15Q9H427 330 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 PLCXD1Q9NUJ7 323 aa13.35□□□□□ -0.27
CCDC9-202ENST00000595659 TXNL1O43396 289 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 CA11O75493 328 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 CD1AP06126 327 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 VDAC1P21796 283 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 CNTFRP26992 372 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 SLC6A1P30531 599 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 GABPB1Q06547 395 aaPredicted RBP13.34□□□□□ -0.27
CCDC9-202ENST00000595659 FOXE3Q13461 319 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 MMDQ15546 238 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 OGFRL1Q5TC84 451 aaPredicted RBP13.34□□□□□ -0.27
CCDC9-202ENST00000595659 TRAT1Q6PIZ9 186 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 ODF3L1Q8IXM7 274 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 NKAIN3Q8N8D7 197 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 OR8H1Q8NGG4 311 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 FBLIM1Q8WUP2 373 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 KCTD7Q96MP8 289 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 SULT4A1Q9BR01 284 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 FAAP24Q9BTP7 215 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 ABHD14AQ9BUJ0 271 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 GON7Q9BXV9 100 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 MRPL20Q9BYC9 149 aaKnown RBP13.34□□□□□ -0.27
CCDC9-202ENST00000595659 MBNL3Q9NUK0 354 aaKnown RBP13.34□□□□□ -0.27
CCDC9-202ENST00000595659 FKBP14Q9NWM8 211 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 ERGIC3Q9Y282 383 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 WSB1Q9Y6I7 421 aa13.34□□□□□ -0.27
CCDC9-202ENST00000595659 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 PTGES3LE9PB15 166 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 LANCL1O43813 399 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 RRP9O43818 475 aaKnown RBP13.33□□□□□ -0.28
CCDC9-202ENST00000595659 GLAP06280 429 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 VSIG8P0DPA2 414 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 MAPK3P27361 379 aaPredicted RBP13.33□□□□□ -0.28
CCDC9-202ENST00000595659 OR3A3P47888 321 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 LUMP51884 338 aaPredicted RBP13.33□□□□□ -0.28
CCDC9-202ENST00000595659 CFHR3Q02985 330 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 CD69Q07108 199 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 TMEM30BQ3MIR4 351 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 UNQ9370/PRO34162Q6UXP9 181 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 C6orf201Q7Z4U5 140 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 LRRTM1Q86UE6 522 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 NEDD4LQ96PU5 975 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 CST11Q9H112 138 aa13.33□□□□□ -0.28
CCDC9-202ENST00000595659 ZNF107Q9UII5 783 aaPredicted RBP13.33□□□□□ -0.28
CCDC9-202ENST00000595659 H0YHG0 523 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 ELANEP08246 267 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 CDX1P47902 265 aaPredicted RBP13.32□□□□□ -0.28
CCDC9-202ENST00000595659 ACTBP60709 375 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 KIR2DS1Q14954 304 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 RBM48Q5RL73 367 aaKnown RBP13.32□□□□□ -0.28
CCDC9-202ENST00000595659 C6orf141Q5SZD1 244 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 STEAP3Q658P3 488 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 NABP2Q9BQ15 211 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 NICN1Q9BSH3 213 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 GHRLQ9UBU3 117 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 JPT1Q9UK76 154 aa13.32□□□□□ -0.28
CCDC9-202ENST00000595659 G3V318 75 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 IGHG4P01861 327 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms