RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 NKX6-3A6NJ46 265 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 CYB5R3P00387 301 aaPredicted RBP13.18□□□□□ -0.3
PNKP-204ENST00000594661 FOXG1P55316 489 aaPredicted RBP13.18□□□□□ -0.3
PNKP-204ENST00000594661 PSG4Q00888 419 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 KISS1Q15726 138 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 IAH1Q2TAA2 248 aaPredicted RBP13.18□□□□□ -0.3
PNKP-204ENST00000594661 C9orf135Q5VTT2 229 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 NUFIP2Q7Z417 695 aaKnown RBP13.18□□□□□ -0.3
PNKP-204ENST00000594661 OR5D18Q8NGL1 313 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 OR10G4Q8NGN3 311 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 OR1F12Q8NHA8 337 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 SSC4DQ8WTU2 575 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 C20orf144Q9BQM9 153 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 LINC00470Q9BZP3 86 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 OR2J1Q9GZK6 312 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 A0A1B0GU03 582 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 OR6C6A6NF89 314 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 PROB1E7EW31 1015 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 HPRT1P00492 218 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 OR10J1P30954 320 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 PNRC1Q12796 327 aaPredicted RBP13.18□□□□□ -0.3
PNKP-204ENST00000594661 TMEM241Q24JQ0 296 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 MRGPRDQ8TDS7 321 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 EXTL1Q92935 676 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 MIEN1Q9BRT3 115 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 OR2H1Q9GZK4 316 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 OR10A2Q9H208 303 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 FKBP11Q9NYL4 201 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 WSB1Q9Y6I7 421 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 MYO7BQ6PIF6 2116 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 A0A1B0GV50 99 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 SOCS1O15524 211 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 WISP2O76076 250 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 LCATP04180 440 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 GSTP1P09211 210 aaKnown RBP13.17□□□□□ -0.3
PNKP-204ENST00000594661 KLF3P57682 345 aaPredicted RBP13.17□□□□□ -0.3
PNKP-204ENST00000594661 ARF1P84077 181 aaKnown RBP13.17□□□□□ -0.3
PNKP-204ENST00000594661 RNPS1Q15287 305 aaKnown RBP13.17□□□□□ -0.3
PNKP-204ENST00000594661 COL5A1-AS1Q5SY13 56 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 PP6455Q8WZ26 134 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 PYGO2Q9BRQ0 406 aa13.17□□□□□ -0.3
PNKP-204ENST00000594661 PRSS47A8MTI9 375 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 E5RGE8 158 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 GPR137BO60478 399 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 ELLP55199 621 aaPredicted RBP13.16□□□□□ -0.3
PNKP-204ENST00000594661 PMS2P11Q13670 270 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 KRTAP27-1Q3LI81 207 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 SGPP2Q8IWX5 399 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 MRPL41Q8IXM3 137 aaKnown RBP13.16□□□□□ -0.3
PNKP-204ENST00000594661 GLRX2Q9NS18 164 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 AURKAIP1Q9NWT8 199 aaPredicted RBP13.16□□□□□ -0.3
PNKP-204ENST00000594661 NAGKQ9UJ70 344 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 NSG2Q9Y328 171 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 PRRC2CQ9Y520 2896 aaKnown RBP13.16□□□□□ -0.3
PNKP-204ENST00000594661 DCHS1Q96JQ0 3298 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 ZNHIT1O43257 154 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 CIDEAO60543 219 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 CEACAM4O75871 244 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 PPBPP02775 128 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 FCGR2AP12318 317 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
PNKP-204ENST00000594661 GPR157Q5UAW9 335 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 TMEM182Q6ZP80 229 aaPredicted RBP13.16□□□□□ -0.3
PNKP-204ENST00000594661 C1QL2Q7Z5L3 287 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 LHFPL1Q86WI0 220 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 MCEMP1Q8IX19 187 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 APH1AQ96BI3 265 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 C1orf123Q9NWV4 160 aa13.16□□□□□ -0.3
PNKP-204ENST00000594661 A0A096LPE4 126 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 TRAV17A0A0B4J275 112 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 A0A1W2PPZ6 126 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 MED19A0JLT2 244 aaPredicted RBP13.15□□□□□ -0.3
PNKP-204ENST00000594661 CEBPGP53567 150 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 PCBD1P61457 104 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 FAM189A2Q15884 450 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 MAJINQ3KP22 176 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 CRIP3Q6Q6R5 217 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 PIGTQ969N2 578 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 ZNF2Q9BSG1 426 aaPredicted RBP13.15□□□□□ -0.3
PNKP-204ENST00000594661 CABLES2Q9BTV7 478 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 CTDSP1Q9GZU7 261 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 CUL9Q8IWT3 2517 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 URB1O60287 2271 aaKnown RBP13.15□□□□□ -0.3
PNKP-204ENST00000594661 C20orf202A1L168 122 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 SLC22A20A6NK97 555 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 SCGB1D1O95968 90 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 IGHG3P01860 377 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 PI3P19957 117 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 RAB7AP51149 207 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 TMEM50BP56557 158 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 P2RY6Q15077 328 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 TAF9Q16594 264 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 NRN1LQ496H8 165 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 Q6ZSR3 168 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 TGIF2LYQ8IUE0 185 aa13.15□□□□□ -0.3
PNKP-204ENST00000594661 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms